Polyodon spathula (Mississippi paddlefish): 121319851
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Entry
121319851 CDS
T07273
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319851
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121319851
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121319851
NCBI-ProteinID:
XP_041113654
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All DBs
Position
8:complement(34441052..34482873)
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AA seq
858 aa
AA seq
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MRTKVQNRFEERQESLNRDSDAEQNAAIKLAQERDEIVSKYDKGKDGATVEPWEDANYHL
YKVTDRFGFLQANELPSYDSVEEKQKLQEVERTTKWLKMMKSWDKYKNSEKLMRRIYKGI
PIQLRGEIWGLLLDIPKIKAEKKGFYEKLKQRARVLSPDIRQIDLDVNRTYRDHIMFRDR
YDVKQQALFHVLTAYSMYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQKHVMH
GFFVPGFPKLLRFQEHHDRILKKMMPKLKQHLDNQEVFTNLYTMKWFFQCFLDRTPFTLT
LRIWDIYILEGEKILTAMSYTILKLHKKHLMKLSMEELVEFLQETLSKDFFFDDDFVIDQ
LQNFMSELKRSKLELPPPGKEDEIPKRPLGQMPPEPQPLISNHIVNGQSNSAKSEVHSHM
RKKSSPERDKDKPSIISGRKDLIEKSIAKQQKPDKHEGRARGSSEAELHKQHGVPAPQTS
GQYSPRQFNNVAAKHNLNATSSTRKDFPPRWNIPSEIKLVEAAAKAAADGRSMAANYRIP
SSSSRDEAQMFLVRPKTRGLIIDETRRGSNASQYDNVSGAEPDFENRVDGLLERSTSHSP
KNESTLFNPSLKSASPTKMLNNVSVGGQQRSRLHIVQFDSPDQRSHGKPPPSYSVPPGYG
HSPTRAQYNYSIDVRPDDRQYGTMLPTLADLSPEKTHMNAYPINSYQFSSSSQANRIIVT
SADRNAQYDSVNSSNYLRQPAKLVGVPVYPQVDYMQENRKRLDQVSAYRPEHHGRQWNQE
VDARYMGNMPRSPSFQRAQMDPVQEFNYSAAYIDASLRYRTPYPEPPAPSRQLHQTSLNT
QHYRYPTDGHSAQESALL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcggactaaagttcagaatcgctttgaggagcgccaggaaagcttaaacagggattcc
gatgcagaacagaatgctgcgattaagcttgcccaggaaagagatgaaatagtatccaaa
tacgacaagggaaaagatggagcaactgtggaaccctgggaggatgccaactaccatctc
tacaaagtcacagacagatttggatttttacaagcgaatgagcttccgtcatatgattca
gtggaagagaagcaaaaacttcaagaagttgagagaactacaaaatggttgaaaatgatg
aagagctgggataaatacaagaacagtgaaaagcttatgagaagaatatataagggaatc
ccaattcagcttcgaggagagatatggggtttgcttcttgatataccaaaaattaaagct
gagaagaaaggtttttacgagaaactaaaacagagggcaagagtgctttcaccagatatc
aggcagattgatctcgatgtgaaccgtacgtacagggaccatataatgttcagggataga
tatgatgtaaagcaacaagcgttattccatgttttaactgcatattccatgtataacaca
gaagtgggatattgccagggaatgagccaaatcacagctttgctgctcatctatatgaat
gaagaggatgccttctgggcccttgtgaaacttctgtctggtcaaaaacatgtaatgcac
gggttttttgttcctggatttccaaagctcctgaggtttcaagaacaccatgacaggatt
ttgaagaagatgatgcctaaacttaagcaacacttggacaaccaagaagttttcaccaac
ctttacaccatgaaatggttctttcagtgtttccttgatagaactccctttactttaact
ctaaggatatgggatatctacatactagaaggagagaaaatccttacagctatgtcttac
actatccttaaactccacaaaaagcacctgatgaagctgtcaatggaagagctagtggag
ttccttcaggaaacactgtccaaagattttttttttgatgatgactttgtgatagatcag
cttcagaacttcatgtcagagctaaaacggtcaaagttagaactgccaccaccaggtaaa
gaggatgaaattccgaagaggccactggggcagatgccaccagagccacagcctctcatc
tcaaatcatattgtcaatgggcagagcaatagtgctaagtcagaagtacactctcacatg
agaaaaaagtcctctccagagagagacaaggataaaccttccattatcagtggaagaaag
gacttgattgaaaaatccatagctaagcaacaaaaacctgataaacatgaaggccgtgct
cgaggttcttcagaagcagaacttcataaacaacatggtgtaccagcacctcaaacttca
ggtcagtacagccctaggcagtttaacaatgtagcggctaaacataacttgaatgctact
tcaagcacaaggaaagactttccacccagatggaatataccttctgaaattaaacttgtg
gaagcagctgcaaaggctgccgctgatggtaggagtatggctgcgaactacagaattcca
agttcgtccagtcgtgatgaagcacagatgtttttggtgaggccaaagactagaggtttg
attattgatgaaactagaagggggtccaatgcatcgcagtatgataatgtttctggagct
gaacctgactttgaaaaccgtgtcgatggactgctggaaaggtccacttcacacagtcca
aaaaatgagtcaactttgttcaatccgtcactgaaatctgctagtccaacaaaaatgttg
aacaacgtcagtgttggtggtcaacagagatctcgcttgcacatagtacagtttgatagt
ccagaccaaaggtcccatgggaaaccccctccatcttattctgttcctcctggttatggt
cactctccaactcgagcacagtacaactacagcattgatgtcaggcctgacgacagacaa
tatggtaccatgctgcccactcttgcagacctatctcctgaaaagacacatatgaacgcc
taccctattaatagctatcagttttccagctcttcccaggccaatcgtattattgtcacc
tctgctgacagaaatgcacagtatgattctgtaaattccagcaactatttaagacagcct
gcaaagttagttggtgtgccagtgtacccccaagtggactatatgcaagaaaacaggaag
cgactggaccaggtttctgcctacagaccggagcaccatgggcggcaatggaatcaggag
gttgatgctcggtacatgggaaatatgccaaggtcaccaagctttcaaagggcacagatg
gacccagttcaagagtttaactattctgctgcatatatagatgcttcacttcgatacagg
actccatatccagaaccaccggctccaagtagacagctgcaccaaacctctttgaataca
caacactacagatatcctacagatgggcattcagcacaagaatcggcgctactgtga
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