Polyodon spathula (Mississippi paddlefish): 121319908
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Entry
121319908 CDS
T07273
Name
(RefSeq) hepatocyte growth factor-like
KO
K05460
hepatocyte growth factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04020
Calcium signaling pathway
pspa04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121319908
04020 Calcium signaling pathway
121319908
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121319908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pspa04052
]
121319908
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121319908
Cytokines and neuropeptides [BR:
pspa04052
]
Cytokines
Growth factors (RTK binding)
121319908
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121319908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kringle
Trypsin
PAN_1
DUF1986
Motif
Other DBs
NCBI-GeneID:
121319908
NCBI-ProteinID:
XP_041113789
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All DBs
Position
8:complement(37908939..37928961)
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AA seq
713 aa
AA seq
DB search
MWALQILLCLALLVCTESRGAKRNALHDYETSEGVYLNRTNRLLLSKRKALSEVKCARRC
SRNKDLPFVCKAFYYDKKENKCHWLSFTSKAPGVRKELDFRYDLYEKKDYIRECIIGNGS
NYKGMKTITKTGLKCQAWSSMVPHEHSFLPSKYRSKDLEDNYCRNPDNEASGPWCFTTDP
DIRHQSCDIPQCSEDECLTCNGENYRGSMDHTETGKECQRWDLNRPHKHMFHPKRYPEKG
LDDNYCRNPDKRLRPWCFTLHPNTTWEYCSIKVCAESVKSDPDTTTKCFQDQGEKYRGTV
NTAPNGIRCQRWDSQYPHNHSYTPQNYKCQDLRENYCRNPDGAELPWCFTTDPKVRVAFC
THIPRCGSDTSDPEVHCYNGTGEDYRGHLSKTRSGFPCAMWDESLKSKSWTLSELSTAGL
QKNYCRNPDKDKHGPWCYTNNPSIPWDYCDLKRCETSGSNITETLPSQQSCFVHKRTRIV
GGAPVKIKEASWMVSIQKGNDHWCGGSLVREEWVLAAKQCFSSCVPDLTEYSVWLGFLHL
NEAGREVSSKQVLRISHLVCGPQGSDLVLLKLSGPAWQTEHVRIIQLPVAGCVIKENTYC
TVYGWGETKGTGYDGMLKAVKLPIVGNQICNEYHKGRITVTESELCAGGRKDEGVCEKDY
GGPLVCEEHDSKVVQGVSVHGRGCGRPNRPGIFVSIPYYTDWIHKVFKMLSSP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcactccagattctcctctgcttggcgttgttggtttgcacagaaagtaggggt
gcaaaaaggaatgctcttcatgattatgagacgagtgaaggagtctacttgaacagaacc
aataggctcctcctgtccaaaaggaaagcccttagtgaagtaaagtgtgcgaggcggtgc
agcaggaacaaggacttgccttttgtatgcaaggctttctattatgacaagaaagaaaat
aaatgccactggctgtcatttaccagcaaagccccaggtgttagaaaagaactggacttt
cgatatgatctttatgaaaagaaagattacataagggagtgcatcatcgggaatggatca
aactataaagggatgaagactattacaaaaactggcctcaagtgccaggcctggagttct
atggtgccacacgagcacagctttttgccttcaaaataccggagcaaggacctggaggat
aattactgtagaaatccagacaacgaggcttctggaccctggtgtttcactacagatcct
gacatccgccaccaatcatgtgacatccctcagtgttcagaagatgagtgtctgacttgc
aatggggagaattacagaggatcaatggaccacacagaaacagggaaggagtgccaacgt
tgggacctgaaccggcctcacaaacatatgttccaccccaaacgatacccagagaaagga
ctggatgataattactgtcgtaatcctgacaaaagacttcggccgtggtgcttcactcta
caccccaacactacttgggaatactgcagtattaaagtctgtgctgaaagtgtaaaatct
gatccagacacgaccacaaagtgcttccaagatcaaggggaaaaatacagaggcacagtt
aacacagcacccaatggaattaggtgccagcggtgggactcgcaatacccacacaaccac
tcctatacaccccagaattacaaatgccaagatctaagggagaattactgtagaaatccc
gatggggctgaactgccgtggtgctttacaaccgatcccaaagtgcgggttgccttctgc
acccacatcccacggtgtggttcagacacttctgatcccgaagtacactgttacaatggc
actggtgaggactacagaggacacttgtcaaaaacaagatctggttttccatgtgcaatg
tgggacgagagcctcaaaagcaaaagttggactttaagtgaactgtcaacggcaggtctg
cagaagaactactgccggaaccctgataaagataaacatggcccctggtgctacacaaac
aacccctcaattccttgggactattgtgatttaaagcgctgtgaaacatctgggtccaac
attacagaaacacttccttcacaacagtcctgttttgttcataagagaaccagaattgtt
ggaggtgctccggtgaaaattaaggaagccagctggatggttagcatacaaaaaggcaac
gaccattggtgtggtggatcattagtaagagaggaatgggttcttgcagctaaacagtgc
ttctcctcatgcgtacctgatttaacagaatacagtgtctggctgggatttcttcatctc
aatgaagcaggaagagaggtttcaagtaaacaagttttaaggatctcccatcttgtctgt
ggaccacagggctccgatctagtgttgctgaaattatcagggcctgcttggcagactgaa
catgttcgcataattcaactccctgttgcaggatgtgtcattaaagaaaatacctactgt
acagtttatggatggggagaaacaaaaggaactggatatgatggcatgctgaaagcagtg
aagttaccaattgttgggaatcaaatatgtaatgaatatcataaaggaaggattacagtg
acagaatcagagctctgtgctgggggaaggaaggatgaaggagtatgtgagaaagactac
gggggcccactggtgtgtgaggaacatgattctaaagtagtacaaggtgttagtgttcat
ggccgaggctgtggtcgtcctaaccgtcctgggatctttgtcagtataccatattacaca
gactggattcacaaagtcttcaaaatgctatcaagcccttaa
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