Polyodon spathula (Mississippi paddlefish): 121319925
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Entry
121319925 CDS
T07273
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00071
Fatty acid degradation
pspa01212
Fatty acid metabolism
pspa03320
PPAR signaling pathway
pspa04148
Efferocytosis
pspa04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
121319925
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121319925
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121319925
03320 PPAR signaling pathway
121319925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121319925
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
121319925
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121319925
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
PANTS-like
Motif
Other DBs
NCBI-GeneID:
121319925
NCBI-ProteinID:
XP_041113827
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Position
8:complement(39190799..39208213)
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AA seq
771 aa
AA seq
DB search
MAEAHQAVAFQFTVTPDGIDFHLSREALKNIYLSGITSWRKRLIRFKNGVLTGVYPASPS
SWLIVVIAIMSTMYARIDPSMGMIDCIKKTLPVNGYLAVQTQTVLSAMLFATGLWVSLIL
VLRYILKMLLSYHGWMFEPHGRMSRTTKIWATLVKIFSGRRPLLYSFQASLPRLPVPGVD
DTIKRYLESVRPLLDDEQYNRMESLANEFKKDPAPKLQKYLILKSWWATNYVSDWWEDYI
YLRGRSPLMVNSNFYAMDLLYVTPTHRQAARAGNVVHAMLIYRRKLDREEHSPMRALGIV
PMCSYQMERMFNTTRIPGIETDFIQHLKDSKHMVVYHKGRFYKVWLHHGGRHLQPCELEM
QFQKILDDKTEPQPGELKLAALTAGERIPWARARVKFFSQGINKVSLDAIEKAAIFMTLD
EEEQGYDKEKLRSIDFYAKSLLHGKCYNRWFDKSFNLIAYKNGKLGINAEHSWADAPIVG
HMWEFVLATDHFQLGYTEEGHSKGDMNKMLSPPSKLQWDIPQECQDITESSYKMAKVIAD
DVDFHGCLFDDFGKGLIKKCRTSPDAFIQIALQLAHFRDKGEFCLTYEASMTRLFREGRT
ETVRSCTMESTAFVNAMENPDKTNEERLELFHVAAEKHQNMYRLAMTGAGIDRHLFCLYV
VSKYLGIDSPFLKQVLSEPWRLSTSQTPQQQLNMVDLNKYPQYISAGGGFGPVADDGYGV
SYIIVGEDLITFHISSKFSSPETDSYRFGQNIRQAMLDIKGLFNTKKDKKM
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcacatcaggcagtcgccttccagttcacggtaacgccagatggaatcgac
tttcacttgagccgcgaggcgcttaaaaacatttacctttctggaataacctcatggagg
aaacgtctaatcagatttaagaatggtgttctgactggggtttacccagcaagcccctca
agctggcttattgtcgtcattgctatcatgagtacaatgtatgccagaatagacccctcc
atgggaatgattgattgcatcaaaaaaaccctgccagtgaatggttatctggctgttcag
acccaaacagttctgagtgccatgctatttgctacaggcctatgggtgtccctgatcctg
gttctccgctacatactcaaaatgctgctttcttaccatggctggatgtttgagccgcat
ggaagaatgagtaggactaccaagatctgggcaacccttgtgaagatattttctggacgc
aggcccttgctgtacagtttccaggcctctctgccacgtctgccggtgcctggagttgat
gacaccatcaagaggtacctagagtcagttcgccccctattggatgatgagcaatacaac
aggatggaaagtttggcaaatgagtttaaaaaagacccggcccccaaactacaaaaatac
ctgatcctgaaatcctggtgggcaactaactatgtgagtgattggtgggaggattatatt
tacctgagaggccggagccctctcatggtgaatagcaacttttacgccatggaccttctt
tatgtgactccaactcaccggcaagccgctcgggccggcaacgtagtccatgccatgttg
atctaccgtcggaaactagaccgcgaggaacacagtccgatgagagcattaggcattgtt
cccatgtgctcctatcagatggaaaggatgttcaacactaccaggatcccaggcattgag
actgattttattcagcatttaaaggacagcaagcacatggtggtgtaccacaagggccgc
ttctacaaggtgtggctccatcatgggggccggcacctccagccctgcgaactggagatg
cagttccagaagatcctggatgataaaacagagccacagcctggggaactcaagctggct
gcactgaccgcaggtgaacggattccttgggccagagctcgtgtcaagttctttagtcag
gggattaacaaggtctctcttgatgccattgagaaagcagccatattcatgactctggat
gaagaggagcaaggctatgacaaagagaagctaagatccattgacttctatgcaaaatct
ctgttacatgggaaatgttacaacaggtggtttgataaatcttttaacctgattgcctat
aagaatgggaagttaggaattaatgcagaacattcctgggctgatgcaccaattgttgga
catatgtgggagtttgttttagcaacagatcattttcagttgggatacactgaagaggga
cacagcaaaggagacatgaacaagatgctatcccctccaagcaagctgcagtgggatatt
ccacaagagtgtcaggatattactgagagttcctacaagatggccaaagtgattgcagat
gatgttgatttccatggctgtctgtttgatgactttggaaaaggcctgattaaaaaatgc
agaacaagtcctgacgcctttatacagattgctctacaactggcacatttcagggacaag
ggagagttctgtctgacatatgaagcttcaatgacccgtttgttccgggaaggtcgaaca
gaaactgtacgctcctgtaccatggaatcaacagcatttgttaatgccatggagaatcca
gataaaacaaatgaagagagactggagctgttccacgtggctgctgagaaacatcagaac
atgtaccgactggcaatgactggagcgggcattgatcggcaccttttctgtctctatgtt
gtgtccaaatacctgggaattgactccccattcctgaaacaggtgctgtctgaaccctgg
cggctgtccacaagccagactcctcagcagcagctcaacatggttgatttgaataaatat
cctcaatacatcagtgctggaggaggatttggaccagtggcagatgatggatatggtgtg
tcgtatatcatcgtaggagaagatttaatcactttccatatttccagcaaattctccagt
cctgaaactgattcctatcgctttgggcagaacattcgtcaagcaatgctggatatcaaa
ggtttattcaacactaagaaagataagaagatgtaa
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