Polyodon spathula (Mississippi paddlefish): 121319952
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Entry
121319952 CDS
T07273
Name
(RefSeq) transcription factor EC-like isoform X1
KO
K15591
transcription factor EC
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121319952
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
121319952
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GFIT
Motif
Pfam:
DUF3371
MITF_TFEB_C_3_N
HLH
Motif
Other DBs
NCBI-GeneID:
121319952
NCBI-ProteinID:
XP_041113884
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All DBs
Position
8:40139602..40186506
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AA seq
456 aa
AA seq
DB search
MDSGPTGKVMFPSQLGLRMQLMREHLDKRERRGREQQGQAGAHYFTPQLPCPPHPFTSSF
HEEPQTARHTPNNIHKVQTHLENSTKYHIQQAQRQKQYLTLGTKLANQRHSISHHHPVQS
LGTGQVIKNGHPPSVNDSGTQDSPVTLLTLAANHNNEFQMDEVIDDLLSLESGFNDDALE
CMEPNVIMPNTLPLTCSILDAYGGNQGMTATNYGLTSGSCPTNLNEKREATEFDTRALAK
ERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQKEQ
QRVRELENRQKKLEHVNRRLLLQIQELEMQARAHGLPTMVSSLATVDLASHLMKQQQQQH
PYREDTNGEYMQQMAMSQISGNDLNHGSTTFSDPLSHFTDFSFSATLKEEHRLDEVLMDE
NLSPFGTDPLLSATSPVVSKGSSRRSSFSTDDGDDL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggaccgacgggaaaggtgatgttcccctcacaactgggactccgcatgcag
ctgatgagggagcatcttgacaagcgggaaaggagaggcagagagcagcagggacaggct
ggagcgcactacttcacacctcagctgccctgcccgccgcaccccttcaccagctccttc
cacgaggaaccacagactgccagacatacgccaaacaatatccacaaggttcagactcac
ttggaaaactcaacaaagtaccacatacaacaagcccagagacagaagcagtacctaacg
ctaggtaccaagctagccaatcagagacattcaatctctcaccaccatccagtacagtcg
ctgggtacagggcaggttataaagaatggacatcctccatctgtaaatgacagcggtacc
caagacagtccagtgacactactgacacttgcagccaaccataacaatgagttccaaatg
gatgaagttattgacgacttattgagccttgaatctggtttcaatgatgatgctttggaa
tgtatggagccaaatgttatcatgcctaacactctgccactcacctgcagtattttggat
gcgtacggcggtaaccaaggtatgacagctactaactacggactgacatctggttcatgt
cccacaaacctcaatgaaaaaagggaagccacagaatttgacacacgtgctctagccaaa
gaacgacagaaaaaagacaaccacaatttaattgaaagaagacgaagatacaatattaat
tacagaatcaaggaacttggcacactaattccaaagtcaaatgatcctgatatgcgatgg
aacaaaggaacgattctaaaagcatcagtggagtatattaaatggctccagaaagagcag
cagcgagtgagagagcttgagaacaggcaaaagaaactggaacatgtcaacaggaggctt
ctcctgcaaattcaggagctggaaatgcaggcccgtgcacatggactccctaccatggtc
tcttcattagcgactgtggacctcgcctcccatctcatgaagcagcagcaacagcagcac
ccttaccgggaggacacaaacggagagtatatgcagcagatggcaatgtctcagatctca
ggcaatgacctcaatcacggctcaacgaccttctccgatccactgtcacacttcacagac
ttctccttcagcgccacactaaaagaagaacaccggctggatgaggttctgatggatgag
aacttgtctccatttgggactgatcctctcttgtctgccacgtcgcccgtcgtttccaaa
gggagcagcaggaggagcagctttagcacagatgatggggatgacttatga
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