Polyodon spathula (Mississippi paddlefish): 121319962
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Entry
121319962 CDS
T07273
Name
(RefSeq) leucine-rich repeat neuronal protein 3-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121319962
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121319962
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
I-set
Ig_3
ig
LRR_14
Ig_2
fn3
LRR_EndoS
LRR_Zer-1
Pur_ac_phosph_N
LRRCT
Fn3_ELFN
C2-set_3
Motif
Other DBs
NCBI-GeneID:
121319962
NCBI-ProteinID:
XP_041113901
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All DBs
Position
8:complement(41121213..41148222)
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AA seq
708 aa
AA seq
DB search
MKDMLFAVHVFVVAVTALVHAVEKKVDCPQSCVCEVRPWFSPESIYMEAPTVDCNDVGVF
ILPQRLPSDTQVLLLQTNSIAKIEKPVDYLANITEIDLSQNNLSSMSDINLGHLLQLLSL
HMEENKLHKLPDNCLPGLANLQELYINHNFISVIAPGAFKGLQNLFRLHLNSNRLQMIKS
QWFEAIPRLEILMIGENPIIKIQDMNFKPLINLRSLVLARMNLTEIPDSALAGLDNLESI
SFYDNTFAKVPHSALQQIPSLKFLDLNKNPIQRIQRGDFHDMLHLKELGINNMPELVSID
SLALTNLPELTKIEATNNPKLSYIHPNAFYKLPRLETLMLNSNALSALYRITVDSLPNLR
EVSMHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVEPPEFEGQHVKQVLFREMMEICLP
LIAPESFPPQINSYNGSSVSLHCRAFAEPEPEIYWITPSGNKVLPNTVTEKYYMHPEGTF
EIYDITEHEAGLYTCVAHNLVGADLKTILLKVDGSFPQPTNESLNVNIKDVKTNSVVVSW
ENSPKSLASNIKWSTTMKVNAPTVTYTVRVPADVKVYNLTFLNPSTEYEVCVDVPSIHQQ
NDKTCVNVTTRGLDLAVKTKEKWSTATLIAVLGALTGVAFMSCLIFYVAFRRNCILGNNF
LSNSQSKKPPILLDELYSPLTSLWVSEKVVGSAVEVKATVIDVSNNFL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatgttgtttgctgttcatgtttttgttgttgcagtgactgctttagtacac
gctgtagagaagaaagtggactgcccccagtcatgtgtttgtgaagtaaggccgtggttc
tcgccagaatccatttatatggaggctcctacagtcgactgtaatgatgtaggagttttt
attttacctcagagattaccatctgacacccaggttttattgctacagactaacagcatt
gcaaaaatcgaaaaacctgtcgactatctggccaacatcactgagatagacttatctcaa
aacaatttatcctcaatgagtgacatcaatctaggacatctgctccaacttctgtctcta
catatggaggaaaacaagctacacaaactgcctgacaactgtttgcctggactggccaat
cttcaggaactttacatcaatcacaacttcatctctgttattgcacctggagccttcaaa
gggcttcagaacctcttcaggctccaccttaattccaacaggttgcagatgatcaagagt
cagtggtttgaggcaattccacggctagagattctcatgattggggagaatccaatcatc
aaaatccaagatatgaattttaaaccacttattaatctgcgcagcctggttttagcaaga
atgaatcttactgaaatacctgacagcgctttagctggtcttgataatttggagagcatc
tcgttttatgacaacacatttgctaaagtgccccattccgctcttcagcagattccaagt
ctaaaatttttggatctaaataaaaaccccatacaaagaatacagagaggtgacttccat
gatatgctacacttgaaggagttaggaataaacaacatgcctgaactggtatcaatagat
agcctcgctttaaccaatttgccggaactgacaaaaatagaagcaacaaacaacccaaag
ttatcatatatccacccaaatgctttctacaaactccccagacttgaaacattgatgctc
aatagtaatgctctcagtgccctatatcggattacagtagactctctgcctaaccttaga
gaagtaagcatgcacagtaatccgatcagatgcgattgtgtcatccgttggataaacatg
aataaaactaatatacgatttatggagcctgattctttgttttgtgttgaaccacctgag
tttgaaggccagcatgtaaaacaagtccttttccgagaaatgatggaaatatgccttcct
cttattgccccagagagtttccctcctcaaattaattcctacaatgggagttctgtttct
ttacactgtagggcatttgcagaaccagagcctgaaatttactggatcacaccttcaggc
aataaggtcttgcccaatacagttactgagaaatactacatgcatcctgaaggaaccttt
gaaatatatgatattacagaacatgaagctggtttgtacacctgcgttgcccacaacctt
gttggcgcagatttaaaaactattttgctaaaagttgatggatcttttccacaacctaca
aatgagtctttgaatgtcaacataaaggacgtgaaaactaattcagtggtggtatcctgg
gaaaactctcctaagagtttagcatctaatattaaatggtccacaactatgaaagtaaat
gctccaactgtcacttatacagtcagagtcccagcagatgtgaaggtttacaacctaacc
tttctaaacccatcaacagagtacgaagtatgtgtggatgtccctagcatccaccagcag
aatgacaagacatgtgtcaatgtcacaacaagaggattagaccttgcagtgaaaacaaaa
gaaaagtggagcacagcaacattgattgcagtccttggagcacttacgggtgtagctttc
atgtcttgcctcatattttatgtagcttttaggagaaactgcatattaggaaataacttt
ttaagcaattcccagtcaaaaaagccacccattcttttagatgagttgtattctccactt
actagcctttgggtatctgaaaaggtagtgggttcagctgtagaagtaaaagccacagta
atagatgtgtcaaacaatttcttataa
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