Polyodon spathula (Mississippi paddlefish): 121319994
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Entry
121319994 CDS
T07273
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121319994
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121319994
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121319994
04121 Ubiquitin system [BR:
pspa04121
]
121319994
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121319994
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121319994
Membrane trafficking [BR:
pspa04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121319994
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121319994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Motif
Other DBs
NCBI-GeneID:
121319994
NCBI-ProteinID:
XP_041113974
LinkDB
All DBs
Position
8:43462026..43487679
Genome browser
AA seq
990 aa
AA seq
DB search
MAEGGAADLETQRAEIATLLKTQLRKGETWYLADSRWFKQWKKYVGFDNWDKYQMGDQNV
YPGPIDNSGLLKDGDSLSLKEHLIDELDYILVPTEGWNKLVSWYGLTENQEPVARKVVEQ
GMFVKHCKVEVYLTELKLCEDGNMDNLVTRRFSKADTIDTIEKEMRKCFTIPDEKETRLW
NKYMSNTFEPLNKPDSTVQDAGLYQGQVLVIEQKNDDGTWPRGSSTPKSPGASHFSTLPK
ISPSSLSNNYNSFNNRNVKNSNYCIPSYSSYNNYDYQEQGRHNEQPGLCGLCNLGNTCFM
NSAVQCLSNTPPLTEYFLNDKYQEELNMDNPLGMRGEIAKAYADLIKQIWSGKFNYITPR
AFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRIRKKPYIQLKDTEGRPDKVVAE
EAWEIHLKRNDSIIVDIFHGLFKSTLVCPECCKVSVTFDPFCYLTIPLPMKKERTLEVYL
VRLDPLTKPMQYKLVVPKVGYLSDLCAALSTLSGVPADRMIVTDIYNHRFHRIFATDENL
SSIMERDDIYVFEMAINRSEDTDHVIIPVYQREKYRQSGYNHSGSPLFGQPFLITVPRVI
SEDKFYNMLLLRMCRYVQTTTENDEGEETPLCCKERSINGNGSNGVHEEGSPSTSTSEME
TDEQDDESSQDQELPSENDNSQSEGSVGGDNDLENGIGADQKSKGQQQLVGHKKRLFTFQ
FNNLGNTDFNYMKEETRQIRFDDRQHRLDERSYLSLDWEPGLKKIYFDDNAAEDFEKHES
MEYKPQKKVFVKLKDCIELFTTKEKLGIEDPWYCPNCKQHQQATKKLDLWSLPPVLVVHV
KRFSYSRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYDLIAVSNHYGGMGGGHYTAF
AKSKDDGKWYYFDDSSVSTATEEQIVSKAAYVLFYQRQDTISGTGYFALDREAEKGASAA
AGAPAESDEDLNENDNNEHDVENENCMHTN
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaggagcggctgatctggaaactcaacgcgcggagatcgcgactctgtta
aaaacacaactgcggaagggagagacctggtatttggctgatagccgctggttcaaacag
tggaaaaaatatgttggttttgacaactgggacaaataccagatgggagaccagaatgtg
tatccaggtcccattgacaattctggactcctcaaagatggcgactccctgtctcttaag
gaacacctcattgatgagttggactatatcctggtacctactgagggttggaataagctg
gtcagttggtatgggctgacagagaaccaagagccagtagcaagaaaggtggttgaacag
ggtatgtttgtaaagcactgcaaagtagaggtgtatcttacagaactgaagttgtgtgag
gatggaaacatggacaatcttgtaactagacgatttagcaaagcagacacaatagacaca
attgaaaaggagatgagaaaatgttttactattcctgatgaaaaggagactagattgtgg
aacaagtacatgagcaacacatttgaacctttgaacaaacctgacagcactgtacaggat
gctggtctttaccaaggacaggttcttgtaatagagcaaaaaaatgacgatggaacgtgg
ccaagaggttcttctacacccaagtcaccaggtgcttcacatttttctactttaccaaag
atctcgccttcatctctatcaaacaattataacagcttcaacaacagaaatgtaaaaaac
tcaaactactgtatcccatcatactcttcttataacaactatgattatcaagagcaagga
agacacaatgagcagcccggcctgtgtggcttgtgtaacttggggaacacttgtttcatg
aactcagctgtacagtgtttaagtaatacacccccactaacggagtacttcttaaatgat
aaataccaggaagagctgaacatggacaatcctttagggatgcgaggtgaaatagcaaaa
gcctatgcagaccttattaagcaaatatggtcaggaaagttcaactatattactccaagg
gcatttaagacgcaagttggcagatttgcaccccagttttctggctaccaacaacaggac
tctcaagagctcttggctttcctccttgatggattacatgaagatctaaacagaataaga
aaaaagccatacattcagcttaaagacacagaggggcggccagataaggttgttgcagaa
gaagcttgggagatccatctaaaacggaatgactctattattgtagatatttttcatggc
ctcttcaaatcaaccttggtctgccccgagtgctgtaaggtttcagtgacatttgaccca
ttctgttatctaactattccattacccatgaagaaagagcgcacattggaagtgtacttg
gtccgcttggatccacttacaaaaccaatgcagtacaagctagttgttcctaaggttggg
tatctatcagatctgtgtgcagccctctcaaccttaagcggagtacctgcagacaggatg
attgtaacagatatctacaaccatagatttcacagaatatttgcaaccgatgaaaactta
agtagcatcatggaacgggatgacatttatgtatttgaaatggccattaataggtcagaa
gacacagatcatgttatcatccctgtgtatcaacgggagaaatacaggcaatctgggtac
aaccacagtggctcccctttgtttggtcaaccattcttgatcactgtgccaagagtcata
agtgaagacaagttctataatatgttactgttgagaatgtgccgatatgttcagacaaca
actgaaaatgacgagggagaagaaaccccactctgttgcaaagagcgcagtattaatggc
aacggctctaacggagtacatgaggaaggatccccaagtacgtctacaagtgaaatggag
acggacgaacaggatgacgaatctagtcaggatcaggagcttccttcagaaaatgacaac
agccaatcagaggggtctgtgggaggagataatgacctggagaatgggattggtgccgat
caaaagagcaaagggcaacagcagcttgtgggacacaaaaagcgactctttacattccag
tttaacaacttgggaaacacagacttcaattacatgaaggaagagaccaggcaaatacga
tttgatgacagacaacacaggctagacgagcgatcctatctgtctttggactgggaacca
ggactgaagaaaatatattttgatgacaatgcagctgaggattttgaaaagcacgaaagc
atggaatataaacctcaaaaaaaggtctttgtcaaattaaaagattgtattgagcttttc
actacaaaggaaaaacttggaatagaggatccatggtactgtccgaactgtaaacaacac
cagcaagccactaagaagctagacctgtggtcgctgcccccagttcttgtggtacatgtg
aaacgcttttcctacagcagatatatgagggacaagttggataccttggtggattttcct
ataagtgatttggacatgtcggagttcctgatcaaccccaatgctggcccgtgtcgatac
gatctgattgctgtatctaaccactatggaggaatgggcggaggacactatactgccttt
gctaagagcaaagatgatggtaagtggtactacttcgacgacagcagcgtttctactgca
actgaggagcaaatagtgtccaaggctgcttatgtgctcttctaccagagacaagacaca
atcagtggaactggatattttgcacttgaccgggaagctgagaaaggggcttcagctgct
gcaggggctccggcagagagcgatgaagacttgaatgaaaatgacaataacgagcacgat
gtagaaaatgaaaactgtatgcacactaactga
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