Polyodon spathula (Mississippi paddlefish): 121320062
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Entry
121320062 CDS
T07273
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5-like
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121320062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121320062
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Others
R-spondin
121320062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRRNT
LRR_EndoS
LRR_LRWD1
LRR_R13L1-DRL21
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
121320062
NCBI-ProteinID:
XP_041114152
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Position
8:complement(47319509..47375032)
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AA seq
906 aa
AA seq
DB search
MLHPPFPHCFLVALLLLLVAAGGGTEAGKPQRDCPSICHCEEDGMLLRVDCSDLGLTALP
ANLSVFTSYLDLSMNNITQLPVSALFNLHFLEELRLAGNDLTHIPKGALSGLFNLKVLML
QNNQLRQVPSEALQNLRNLQSLRLDANHIYSVPHNSFSGLSSLRHLWLDDNSLTEVPVQA
LSSLSSLQAMTLALNKITRIPDYAFANLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDL
NYNNLDEFPTAIKALINLKELGFHSNNIKSIPERAFMENPSLISIFFYDNPIQFVGKSAF
QHLPELRTLSLNGATEITEFPDLTGTKSLESLTLTGARISALPAEMCEQLPNLQVLDLSY
NLIQDLPTFNGCERLQKIDLQHNEIQEIQTNTFQHLTALRSLDLAWNKLCAVHPNGFSHL
PSLIKLDLSSNLLSSLPVTGLHGLTHLKLAGNTDLQELLSAENFPKLRVMEMPYAFQCCA
FVSCENHNKMSNPWDKDETRSTDHFVKKDSGILLSQEEHDFEDFLLDFEEDPKAHHSVQC
TPAPGPFRPCDHLFGSWLIRTGVWIIVVLSLVCNGLVAVTVFVSPTYISPAKHLIGLLAV
VNSLMGLSSGVLAVVDALTFGSFAKYGAWWESGIGCRITGFMSVFSSETCTFLLTTAALE
RGLSIKCAKKLESKSTKSNVKIVSAFCFILALAITVLPLLHVGEYGISSLCLPLPFGEPS
SLGFMVALVLLNSLCYFVMTVTYTRLYCSLEKGELDNFWDCSMIKHVAWLLFANCFLYFP
VAFLSFSSLLNLSFISPEVIKSILLVIVPLPACLNPLLYMLFNPHFKEDLGILLKQTQLL
NKSKQSSLVSLNSEDAEKQSCDSTQALVTFTRSENPGDAPESKSVSSASQIIEACHSQSA
ASVPCH
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcctcctttccctcactgctttttagttgcactgttgctgctgctagtagct
gctggaggggggaccgaagccgggaagccgcagagagactgcccgtccatttgtcattgc
gaggaggatggcatgctcctccgagttgactgctcggacctcgggctcacggctctgcct
gcaaacctgagcgtcttcacatcgtaccttgatctcagcatgaacaacatcacccaactg
cccgtgagtgccctttttaacctccacttcctagaagagctgcgtcttgcaggaaatgac
ttgacacacatccctaagggagccctgtctggccttttcaatcttaaagtgctaatgcta
cagaacaatcagttaagacaggtccctagcgaagcactgcagaatctccgtaatctccag
tctctgcgtttggatgccaatcacatctacagcgttccgcacaacagcttctctggcttg
agttccctgcggcacctctggctggacgacaactccctgacggaggttccagtgcaggct
ctcagcagcctgtcctccctgcaggccatgacattagccctgaataaaataacacgcata
cctgactatgccttcgcaaacctttccagtctggttgtcttacatctccataacaataga
attcactccctgggaaagaaatgctttgatgggcttcacagccttgagactttggattta
aactacaataatctggatgaatttccaactgccatcaaagccttgataaatcttaaggaa
cttggttttcatagcaacaacattaagtcgatcccagaaagagcttttatggaaaaccct
tctctcatatcaatatttttctatgacaaccctatccagtttgttggaaaatctgctttc
cagcacttacccgaactgagaacgctgtcactaaacggagccacagaaatcactgagttt
cctgacctcacagggaccaagagtctggagagcctgaccctgaccggggcgcggataagc
gctcttcccgcagagatgtgcgagcagttaccgaaccttcaagttctagatctgtcttac
aacctgattcaggacctgcccacttttaatggttgtgaaaggctccagaaaattgaccta
cagcacaacgaaattcaagaaatccagaccaacacgtttcagcacctgactgctctgaga
tcgcttgacctggcttggaacaagttatgtgcagttcatcccaatggattctcccatctg
ccttcgttaatcaagctggatctctcatctaacctcctctcctctcttcctgtcactgga
ctgcacggattaacacaccttaaattagcaggcaacacagacctccaggagctattatct
gcggaaaactttccaaaactgagggttatggagatgccgtacgctttccagtgctgtgca
ttcgtatcctgtgaaaaccacaacaaaatgtccaatccttgggacaaagacgagacccgt
agcaccgaccactttgtcaagaaggacagcggcattctgctcagtcaggaagaacatgac
tttgaggacttccttcttgactttgaagaagacccaaaagctcaccactctgtccagtgc
accccagcaccaggtccgttccggccctgtgatcacctgtttggcagctggttaattcgc
accggagtgtggattatagtggtgctgtcacttgtgtgcaatggtctggtggctgtaact
gtcttcgtttcaccaacctacatatctccagctaagcacctcatagggctgcttgcagtt
gtcaacagcctaatggggctttcaagtggtgtcctggctgtcgtcgatgccttaaccttc
ggcagctttgccaaatacggggcgtggtgggaaagcggaattggctgcaggatcacaggg
ttcatgtcagtcttcagctctgagacgtgcacctttttactgacgaccgctgcgctggaa
cgtggcctctccataaagtgcgccaaaaaactggagtccaagtccaccaagagcaacgtc
aagatcgtttccgctttctgcttcatcctggctttggccatcactgtcctgcccctgctc
cacgtgggcgagtacgggatctcctccctgtgtttgcctttgcctttcggggagccatct
agcctgggcttcatggtggccttggttctgctcaactcgctctgctatttcgtgatgacc
gtcacctacaccaggctgtactgcagcctggagaagggcgagctggacaacttctgggac
tgctccatgatcaagcacgtggcctggctgctcttcgcaaactgcttcctttacttcccc
gtcgccttcctgtccttctcctccctgctcaacctgtccttcatcagccccgaagtgatc
aagtccatcctcctggtcattgtcccacttccggcctgcctgaaccccttgctttacatg
ttgttcaacccgcacttcaaggaggacctcggcatcctgctaaagcagacgcagctgtta
aataaatccaagcagagcagcttggtctccttgaactcagaggatgcagagaagcagtct
tgcgactccacccaggcgctggtcaccttcacaaggtcagaaaacccaggtgatgcacca
gagagcaagtctgtctcgtctgcctcccagatcattgaagcttgccactcccaatcagca
gcgtctgttccctgccactag
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