Polyodon spathula (Mississippi paddlefish): 121320065
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Entry
121320065 CDS
T07273
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta-like isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121320065
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121320065
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121320065
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121320065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
FN3_Tor_3rd
Ig_ILCR1
PTP_tm
CysR_MRC2_N
Tc-R-P
Ricin_B_lectin
DSPc
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
121320065
NCBI-ProteinID:
XP_041114155
LinkDB
All DBs
Position
8:47488278..47537288
Genome browser
AA seq
2974 aa
AA seq
DB search
MDALFLVGILTFLPLPSSEGFLIAHVHKGLCLLNNIVLVKLGTCNATSPSQQWKWTQEDK
LLHVHSSRCLWADISSSLPSHARLASLGNCSAAPSWSSCEAAGLLGVADSPLYLKKQGPR
VVVKTGKRYSNWTKYEVDPGGKVVTGSLCAKKGPVKLESITAFLPTTTAKSYIRTLAATS
TIAATSTIAAAATTTKVPVTSTITTKRTRAATSTSAAASTIAATSTVATTSTVAAAATTT
KVPVTSATANTTAATRTIAVTTTSTSAATSTKADTNTSAATSSSSASNTIAATSSDRAAS
TDTAASTNTAASTNTAASTDTAASTDTAASTDTATSTDTATSTDTATSTIIAASTATATS
TDTAASTIIAASTDIAASTNTAASTDTAASTDTATSTNTATSTDTATSTDTATSTIIAAS
TATATSTDTAASTDTAASTIIAASTDTAASTNTAASTDTAASTDTATSTNTATSTDTATS
TIIAESTDTAASTVTATSTDTAASTDTATSTDTATSTDTATSTNTATSTDTAASTNTATS
TDTAASTSIAASTNTAASTVTAASIIIAANTVTAASTDTVASTVTAASTDTAASTDTAAS
TIISASTDTAASTDTGTSTDTVASTDTAAITDTGTSTDTVASTNIAASTDTAASTVIAAS
TDTASSTIISASTDTTASTVRGASTVTGASTIIAASTDTATSTVTAASTIIAASTVTAAS
TNTSASTDTAASTDTATSTIIAESTVTGASTNTAASTDTAASTDTVASTIIAASTDTAAS
TVIAASTDTASSTIISASTDTTASTVRGASTVTGASTIIAASTDTATSTVTAASTIIAES
TVTGASTNTSASTDTAASTDTATSTVTAASTIIAGSTVTAASTDTAASTIIAGSTVTAAS
TVTSPSTVTAVAMSTSTITNSSTTTSTSKIMKILKSLFASNTETVAPSTPENPTVFSTKT
DPLHGLTSTQTTGAPLSTTDYTSDTTYTTEQYTTADPVKCTVNLTETRIATDSVFFQWTS
AGRSCNFSVIHTCNNSRTANCARPIGYNDSYECEVRNLEPGTAYDLGILSSTDGELTNIS
VQTDPKEPENFNINQVTLSSTSLQVQWTASPGHVGWYNVSLLGTDTGQEQSVQVPGSGSS
ETTFTSLVPGSRYTASITAVAGHKTSAALRTAGATVPCAVQNLQLSRVPGGLSASWQHGL
GKVDRYRVLLKDDKSVVLNLTLERSVTTYTFPRLTPGHLYNLTVITEASGLHNESFKLAR
TAPAKVSDLKVSNNGSLDTLTATWSRAAGDVESYTVTLSDNSAAPQGRSLPPGTSQAVFS
GLVSGRLYQVTVSTRSGELQSEAVATSRTVPQKVSQLELRALQGWQNAMRVTWAPPAGEW
ERYRILLLNNSVAIVNSSVDKNTRQYEMRNLGLIPGRLYQAAVIVESGDLKSIAKCEGRT
APHPVLQLIVKHADETSLSVTWATPRAEWDGYLVTLKHRDSTVIETNLQKHVKEYTFSDL
VPGRKYTVLVTTNSGELSNWTSVEGRTVPSQVTNLTISNQGMTDSLHVTWARARGDVESY
RVLLIHESIVIKNESVSADTASYHFHSLKPGSLYSVVVTTVSGVIPSRQTVAEGRTVPSA
VGEVTVSNNGRTDFLSVSWQPASGDVDSYLVTLSHRERAVHAVTVSKTNSKCDFSSLIPG
HLYNISITTRSGIYENHTFVQERTRPSKVQYLRASNSARSDYLIVSWHNATGDFDNYQVI
IKSSNDFIQTTTIPKSQNECVFHSLVPGRLYIITVSKRSGKYEASETTNARTFPAAVRML
TLADRHTEDLRVTWSPAPGDVDRYEIQLLFNDMTVFPSITLSNTAREYQFTSLVPGRLYK
IVVLSFSGDQQRSEFVEGRTVPSVVKNILVSNNGEMNSLKINWTPGAGDVDSYTVTLFQQ
SRLISSHTVPKLVLEHSFHQLQAGELYNIMVQSNSGHLHNNNTAPGRTVPASVTGLVADN
KHTSCSLVVSWQAAAGVAEGYKLELLNEDKSLISNSSVPASARQHRFNELTPGKKYQVRV
ITVSGMLYSKGALTEGRTVPAAVSGLMISGNSTESLSFGWETSEGQFDAYEIFLYNPDDS
LHDRKSGTASLRQCLFRGLLPGRMYKMAIVTRSGDLTNETSIHGRTVPAPVTALHSLNKN
QSDSLWFTWNQAAGDLSGYEISLHNPNRTLQEKRHGDKALRECLFQHLIPGRLYTLVIAT
KSGYLTNKATVEARTAPRPPKSVSFADVTNTSLEISWTAPEDTDYEDFELQWSPQDPLSV
INPYQNGSSGSRILRGLYPGRPYNISVRTVSGTPQTNRAYSQPIYEAIRTKPERIQHIHC
RPQNSTAISCSWSPPQSDYDGYSIECYHQGSRELVYSRRTGKDSSPYNIAGLEPHKRYIV
SVKVLSDKMVSRAVEDSVITMIDRPPLPLDSIRVNEKAVKITKSTIFFKFNCSWFSDVNG
AVKYFTVIVSEADGIEHVQLGQHHPLPSYTDYKLNASIKAYQTNYFASRCTENPDNSIQS
FEIDVGTGLESLGGKCEPQQQRFCDGPLKPRTAYRISIRAFTQLLDGEQKEFAQPLFTDT
HFSEPITTESEPLIGVVEGISAGLFLIVMMIGVSVLLICRQKARKINMQERPRMSARRER
PASVSMHVGVKGNRRISSPITISQFESHFTKLQADSNYLLSEEYEELKDVGRNQSLDTAL
LPENRGKNRYNNILPYDTTRVKLSYVDDDPCSDYINASYIPGCNSRREYIATQGPLPGTK
DDFWKMVWEQNVHNIVMVTQCLEKGRVKCDHYWPFDQDPLYYGDLIVQMLSESVLPEWTI
REFKICSEDQVNVSRVVRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGSGATVVH
CSAGVGRTGTFVSLDRVLQQLDSKDTVDIYGSVFELRLHRAHMVQTECQYAYLHQCVRDV
LRARKLRNDQENPLYPIYENVSPEYHRDMVYARR
NT seq
8925 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgttattcttggttgggatattgacgtttctgcctttaccttcttcggagggt
ttccttattgctcacgtccacaaagggctgtgtctgttaaacaatattgtgctggtgaag
ttggggacgtgcaatgcgaccagtcccagtcaacagtggaagtggacacaggaagacaag
cttctccacgtccactcgtccaggtgcttgtgggcagacatctccagctccctgcccagc
cacgctcgcttggcctcccttggtaactgttctgccgcaccgagctggagctcctgcgag
gcggcgggtcttctcggggtagcagacagccctctctacctgaagaaacagggaccgcgt
gtcgtcgtgaagaccggaaagaggtattcaaactggaccaagtacgaggtcgaccccggg
ggaaaggtggtcacgggcagtctgtgtgcaaagaaaggtcctgtcaaactagaaagtatc
acagcatttctcccaacaactacagctaaaagttatataagaactctagcagccacaagc
actattgcagctacaagcaccattgcagctgcagctacaaccacgaaagtcccagtcaca
agtactattacaaccaaaagaacaagagcagccacaagtacaagtgcagctgcaagcact
attgcagccacaagcactgttgcaaccacaagcactgttgcagctgcagctacaaccacg
aaagtcccagtcacaagtgcaactgcaaatactactgcagccacaagaacaattgcagtc
acaaccacaagcactagtgcagccacaagcacaaaagcagacactaatactagtgcagct
acaagttcaagttcagcttcaaatactattgcagccacaagctctgatagagcggcaagc
actgacacagctgcaagtactaacacagctgcaagcaccaacacagctgcaagcaccgac
acagctgcaagcactgacacagctgcaagcactgacacagctacaagcaccgacacagct
acaagcactgacacagctacaagcactattatagctgcaagcactgccacagctacaagc
actgacacagctgcaagcactattatagctgcaagcactgacatagctgcaagcaccaac
acagctgcaagcactgacacagctgcaagcaccgacacagctacaagcaccaacacagct
acaagcaccgacacagctacaagcactgacacagctacaagcactattatagctgcaagc
actgccacagctacaagcactgacacagctgcaagcactgacacagctgcaagcactatt
atagctgcaagcactgacacagctgcaagcaccaacacagctgcaagcactgacacagct
gcaagcaccgacacagctacaagcaccaacacagctacaagcactgacacagctacaagc
actattatagctgaaagcactgacacagctgcaagcactgtcacagctacaagcactgac
acagctgcaagcactgacacagctacaagtaccgacacagctacaagcactgacacagct
acaagcaccaacacagctacaagcactgacacagctgcaagcaccaacacagctacaagc
actgacacagctgcaagcactagtatagctgcaagcaccaacacagctgcaagcaccgtc
acagctgcaagcattattatagctgcaaacactgtcacagctgcaagcacggacacagtt
gcaagcaccgtcacagctgcaagcactgacacagctgcaagcactgacacagctgcaagc
actattatatctgcaagcactgacacagctgcaagcactgacacaggtacaagcacggac
acagttgcaagcactgacacagctgcaatcactgacacaggtacaagcactgacacagtt
gcaagcactaatatagctgcaagcactgacacagctgcaagcactgttatagctgcaagc
actgacacagcttcaagcactattatatctgcaagcactgacacaactgcaagcaccgtc
agaggtgcaagcactgtcacaggtgcaagcactatcatagctgcaagcactgacacagct
acaagcaccgtcacagctgcaagcactattatagctgcaagcaccgtcacagctgcaagc
acaaacacatctgcaagcactgacacagctgcaagcactgacacagctacaagcactatt
atagctgaaagcactgtcacaggtgcaagcacaaacacagctgcaagcactgacacagct
gcaagcactgacacagttgcaagcactattatagctgcaagcactgacacagctgcaagc
actgttatagctgcaagcactgacacagcttcaagcactattatatctgcaagcactgac
acaactgcaagcaccgtcagaggtgcaagcactgtcacaggtgcaagcactatcatagct
gcaagcactgacacagctacaagcaccgtcacagctgcaagcactattatagctgaaagc
actgtcacaggtgcaagcacaaacacatctgcaagcaccgacacagctgcaagcactgac
acagctacaagcaccgtcacagctgcaagcactattatagctggaagcactgtcacagct
gcaagcactgacacagctgcaagcactattatagctggaagcactgtcacagctgcaagc
actgtcacaagtccaagcactgtcacagctgtggcaatgagcactagtacaattacaaac
tccagtacaactacaagcacaagtaaaattatgaagatcctgaaatccctttttgcttct
aacactgaaacagtcgctcccagcacccctgaaaaccccacagtattcagcactaaaaca
gatcctctccatgggctgacttcgacccaaactacaggagcacctttgtcaactacagac
tacacctcagacaccacctacacaactgaacagtataccactgctgatcctgtgaaatgc
accgttaatctgactgagactagaatcgccacggattccgtcttcttccagtggacgagt
gctggaagatcatgcaatttcagtgtcatacacacctgtaacaattccagaactgcaaac
tgtgctcgacccataggatacaatgattcgtatgaatgcgaggttagaaatctggaacct
ggaaccgcatatgacctggggatattgtcttcgacggatggagagctgacaaacatctca
gttcagacagatcccaaggagccagaaaactttaacatcaatcaggtgacgctcagcagt
actagcctgcaggtgcagtggacagcgtctcccggccatgtgggctggtataatgtcagt
ctgctgggcacagacacaggccaggagcagagtgtacaggtccctgggagcggctcctca
gagaccacgttcaccagcctggtgcctggcagccgctacactgcgagcataactgctgtg
gctggacacaagacctctgctgctctccgcactgccggagctacagttccctgtgctgtg
cagaatctccagctctccagagtcccaggcggcctgtctgcttcttggcagcatggttta
gggaaggtggacagatacagagtgctgctgaaggatgacaagagtgtggttctgaacctg
actctggagagaagtgtcaccacctataccttcccaagactgaccccgggacacctctat
aatctcactgtaatcacagaggcctcgggactgcacaatgaatccttcaaactggccagg
acagcaccagctaaagtgtcagatctgaaagtctcaaacaatggcagcctggatacctta
actgctacctggagcagagcagcaggagatgtggagtcctacaccgtgacgctgtcagac
aacagtgcagcccctcaagggaggagtctgcctccaggcacctcccaagctgtgttcagt
ggcttagtatctgggcgcctttatcaagtcactgttagcaccagaagcggtgaattacag
agtgaggcagtggccacaagcagaactgtccctcagaaagtttcccaattggagctgcgg
gctcttcaggggtggcagaacgctatgagagtgacgtgggctccccctgctggtgaatgg
gagcgctaccgtattctgttgctcaacaactccgttgccatagtgaacagctcagtggac
aagaacacaagacagtacgagatgagaaacttgggcctcatcccggggcggctctaccag
gcagcggttattgtggagagcggagacctgaagagcattgctaagtgtgaaggcagaaca
gctccccaccctgtcctgcagctcattgtcaagcatgctgacgagacgtctctgagcgtg
acgtgggccacccccagagcagagtgggacgggtacctggtcaccctgaagcacagggac
agcacagtgatagaaacaaatctacagaaacacgtgaaggaatacaccttcagtgatctg
gtaccaggaaggaaatacacagtccttgttacaaccaacagcggggaactgagcaactgg
acatcagtggaggggagaacagttccatctcaagtcaccaacctgaccatcagcaaccag
ggcatgacggacagcctgcacgtcacatgggcgcgggcgcggggcgacgtcgagtcctac
cgggtccttctcatccacgagagcatcgtcatcaagaacgagagtgtgtcggcagacacc
gccagctaccacttccactccctcaaaccaggcagcctctacagcgtggtcgtcactact
gtcagcggagtcatcccctctcggcagactgtggcagaggggaggacagttccctctgca
gtgggtgaagtcacagtgagtaacaatgggaggactgatttcctcagtgtctcgtggcag
ccagcctctggggatgtggacagttacctggtgaccctgagccaccgtgagagagcagtg
cacgccgtcacggtgtctaaaaccaacagcaagtgtgacttcagctccctgatcccaggg
cacctctacaacatctccatcaccacacgcagcgggatctatgagaaccacaccttcgtg
caggagcgcactcggccttccaaggtacagtatttgagagccagcaactctgcgagaagc
gactacctcatagtgtcctggcacaacgctacaggagacttcgacaattaccaagtgatc
attaagagcagcaatgacttcattcagaccaccaccatccccaagtctcagaacgagtgt
gtgttccattccctggtccctgggagactgtacatcatcactgtcagcaagagaagcggg
aagtacgaggcgagcgaaacaaccaacgcacgaacgttcccagccgcagtgaggatgctg
actctggcagacaggcacactgaggatctgcgggtcacctggtcccctgctcccggagac
gtggatcgatacgagatccagctcctcttcaacgacatgacggtgttcccttcgataacg
ttgagcaacaccgccagggagtaccagttcacctcgctcgtgccggggcggctctacaag
atcgtggtgctgtccttcagcggggatcagcagcgctcagagtttgttgaaggtcgcaca
gtccccagcgtggtgaagaacatcctggtctccaacaatggggagatgaacagtctaaag
atcaactggacgcccggggcaggggatgtagacagctacaccgtgaccctcttccagcag
agccggctgatctcctcacacactgtccccaagctggtgcttgagcacagcttccaccag
ctgcaggcaggcgagctatacaacatcatggtccaatccaacagcggccatctgcacaac
aacaacacggcccccggaaggactgttccagcctctgtgacgggcctggtcgccgataac
aagcacaccagttgcagcctggttgtaagctggcaggctgctgcaggggtggcggaggga
tacaaactggagctgctcaacgaagacaaaagcctcatctccaacagttccgtgcctgcc
tctgcccggcagcacaggttcaatgagctgacccctggcaagaagtaccaggtccgagtg
atcactgtcagtggcatgctgtacagcaagggggcgctcaccgaaggaagaacagttcca
gcagcagtcagtgggttaatgatctccgggaatagcacagagagcttgtctttcggctgg
gagacctccgagggacagttcgatgcctacgaaatattcctgtacaaccccgacgacagc
cttcacgaccgcaaatctgggacagccagtctgaggcagtgcttgttccgtggtctgctg
ccagggaggatgtacaagatggcgatcgtgacgcgcagtggggatctgaccaacgagacc
tccattcatggaaggacagtccctgccccagtgaccgcactgcactctctgaacaaaaac
cagagcgacagcctgtggttcacctggaaccaggctgcaggagacctctctggatacgag
atatccctgcacaaccctaacagaacactgcaggagaagcgccatggcgacaaagccctg
cgagagtgcctgttccagcacctgatcccggggaggctgtacacattggtcatagccacc
aagagcggctatctcaccaacaaagccaccgtagaggcaaggacagccccacggccgccc
aagtccgtgtcgtttgcagacgtcacaaacacgtcgctggagatctcgtggacagcccca
gaagacaccgattacgaagactttgagctgcagtggtctccccaggatcccctctccgtg
atcaatccttaccagaacggcagttctgggagccgcatcctccgagggctctacccgggg
cggccctacaacatcagcgtgcgcacagtcagcgggaccccccagacaaacagggcctac
agccagcccatctacgaagccatacgaacaaaacccgagcgcattcagcacatccactgc
cggccccagaactccacggccatctcctgctcctggagcccccctcagtcagactacgac
ggctacagcatcgagtgctaccaccagggctcccgcgagctggtgtactcccgacgtacc
ggcaaggacagctcgccctacaacatcgccgggctggagccgcacaagcgctacatcgtc
tccgtcaaggtgctgtccgacaagatggtcagcagagcggtggaagacagcgtaataacc
atgattgaccgtcctcccctcccactggacagcatacgagtgaatgaaaaggcggtgaag
atcaccaagtccacgatcttcttcaagtttaactgcagctggttcagcgacgtcaacggg
gcggtgaagtacttcactgtgatagtgagcgaggcagacggcattgaacatgtacagctg
ggtcaacaccaccccttgccctcgtacacagactacaagctcaacgcttccattaaagcc
taccagaccaattactttgccagccgctgcactgaaaaccctgacaacagcatccagagc
ttcgagatagatgtggggacagggcttgagagcctcggagggaagtgcgagccacagcag
cagaggttctgcgacgggcctctcaagcccaggactgcctacaggatcagcattcgagca
ttcacacaacttcttgatggggaacaaaaggaatttgcccagcccctttttacagacacc
catttctctgaacccataaccactgagtcagagccactaataggcgttgtagaggggatc
agcgctggcttgttcctgattgtgatgatgattggtgtgtctgttctactgatttgccgt
caaaaagcaaggaaaataaatatgcaagaaaggccgagaatgagtgcccgaagagagaga
ccagcgtcagtcagtatgcacgtgggagtgaaaggtaatcgacgcatctcaagccccatc
acaatctcccagtttgaaagccatttcaccaaactgcaggctgattccaactaccttctc
tcagaggagtacgaggagctaaaagatgttggtcgaaaccaatcccttgacacagcactt
ttacctgagaacagagggaaaaatcgttacaacaatatactgccctacgacacaacccgg
gtgaaactttcctacgtggacgacgatccctgctctgactacatcaacgccagttacatt
cctggctgcaactcccgaagagaatacatcgccacacaggggcctctgcccggcacaaaa
gatgacttctggaaaatggtgtgggaacaaaacgtccacaatatcgtcatggtgacccag
tgtttagagaagggaagggtgaagtgtgatcactactggcctttcgatcaggatcccttg
tattacggagatctcatcgtccagatgttgtcggagtctgtcttacccgagtggaccatc
cgcgagttcaagatctgcagtgaggaccaggtgaacgtcagcagggtggttcgtcatttc
cactacactgtgtggccggatcacggtgtccctgaaactacacagtctctgatccagttt
gtccggaccgtgagggattacatcaaccgcagcccgggctccggagctactgtggtgcac
tgcagtgccggtgtgggaaggacaggcacgttcgtctccttggacagggtcctgcagcag
ctcgactccaaggacaccgtggatatttatggttctgtctttgaactgagacttcacaga
gctcacatggtgcagacggagtgccagtatgcgtatttacaccagtgcgtcagagatgtc
ttgagagcaaggaaactacggaacgaccaggaaaacccgctgtatcccatctatgaaaat
gtcagtcctgagtatcacagagacatggtgtatgcaagacgttaa
DBGET
integrated database retrieval system
