Polyodon spathula (Mississippi paddlefish): 121320071
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Entry
121320071 CDS
T07273
Name
(RefSeq) rab-3A-interacting protein-like isoform X1
KO
K16779
Rab-3A-interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320071
03036 Chromosome and associated proteins [BR:
pspa03036
]
121320071
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121320071
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121320071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
Crescentin
FAM76
CC2-LZ
Motif
Other DBs
NCBI-GeneID:
121320071
NCBI-ProteinID:
XP_041114170
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All DBs
Position
8:complement(47666872..47696640)
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AA seq
494 aa
AA seq
DB search
MASDSLEGFHEVNLASPTTPDLRTESEARHLKQPGAVSILYRTHPSVSSSPGPPNSLDAA
QLPTQPVYSTPRHLSIDEASNSSVLAADVQIAVPCSSSGSRHHASQNEPARLEAEFLDGG
VGDRRGEESGDVFGLSTDSLSHLRSPSVMEVREKGYERLKEELTKAQRDLKLKDEECERL
SKVRDQLGQELEELTASLFEEAHKMVREANVKQATAEKQLKEAQGKIDVLQAEVAALKTL
VLSTSPTSPCKDLPPGGKTQFKKGHARNKSTSSAMLGSQQEMSLMQPIVRDCREVDLLLF
SEFKAWREEPTLERTCSFLERIYKEDIYPCLTFSKSELASAILEAVENNTLSVEPVGFQS
LPVVKAAAVECGGPKENTSPILLTQGLLHMSVSMSALQPVFTSPLLFQLSSGKCALSGQT
KMCKHRIKFGDSSNYYYVSPFCRYRITSVCNFFTYIRYIYQGLVKQDAEQMFWEVMQLRK
EMSFAKLGYYKEEL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgactcccttgaaggctttcatgaagttaacctggcttcccccaccacccca
gacctgcgcacagagtccgaggctcggcacctcaagcagcccggcgccgtgtcgatcttg
taccgcactcacccgtctgtgagctccagccctggcccgcccaacagcctggacgcagcg
cagctgcccacccagcccgtgtactccacacccaggcacctgagcatcgatgaggcctcc
aacagcagtgtcctggcagcggatgtacagatcgctgtgccctgctcttcctctggctcc
cggcatcacgcctcccagaacgagcccgcgcgcctggaggcagagttcctcgatggtggc
gtgggagatcgcaggggtgaggagagcggggatgtctttgggctgagcacagacagcctg
tctcacctgaggagcccctctgttatggaagtaagagaaaaaggttatgagagattgaag
gaggagcttactaaagcacaaagggaccttaagttaaaagacgaagaatgtgaaagacta
tctaaagtaagggaccaacttgggcaagaactggaagagctcacagctagcctgtttgag
gaagcccacaagatggtgcgagaagcgaacgtcaagcaggccactgcggagaagcagtta
aaggaagcacaggggaagattgatgttctgcaggctgaagtagctgctttgaaaacactg
gtcctctccacttcccctacctctccctgtaaagacctcccgcccggtggaaagactcag
tttaagaaagggcacgctcggaacaagagcaccagcagcgccatgctgggcagccagcag
gaaatgagcttgatgcagcccatcgtgagggactgcagagaggtggatttgctgcttttc
agtgaatttaaagcgtggagagaggagcccactttagaaagaacatgctcctttttagaa
cgaatctataaagaagatatttacccctgtttaaccttctcaaaaagtgagctagcgtct
gcgatcctggaggctgtagagaacaacactctgagtgtggagcctgtggggttccagtcc
ctacccgtcgtcaaggctgcggcagtggagtgcggaggaccaaaagagaatacaagtcca
atactcctaacacagggcctgctccacatgtccgtttccatgtcagcactgcagcctgtt
ttcacgtcgcctctcttgttccagctctcttcaggaaagtgtgcactcagcggtcagacc
aaaatgtgtaaacacaggatcaagtttggagattccagcaactattactacgtgtctccc
ttttgtagatataggatcacttcagtgtgcaacttctttacttacatccgctacatctat
caaggactggtgaaacaggatgctgaacagatgttttgggaagtaatgcagctcaggaag
gaaatgtcttttgcaaaacttggatattacaaagaggagctgtga
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