Polyodon spathula (Mississippi paddlefish): 121320100
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Entry
121320100 CDS
T07273
Name
(RefSeq) zinc finger protein AEBP2-like isoform X1
KO
K17452
zinc finger protein AEBP2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121320100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121320100
03036 Chromosome and associated proteins [BR:
pspa03036
]
121320100
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121320100
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
121320100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
Spem1
Motif
Other DBs
NCBI-GeneID:
121320100
NCBI-ProteinID:
XP_041114248
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All DBs
Position
8:48861952..48925538
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AA seq
512 aa
AA seq
DB search
MAATSSDSAEQDSPSPSNENGAPPPGETEDELRGLQLPEPKQSDEEKMEEGGEGKGEREV
RGDGDRKAAAEEEDEEEEIGSVSAGGEEETSEQQSPASSSETGDGPEKELKQDQSGEFES
GDCNQKSKAAEDTLDKGNTTGGVVSEHANKRRASVEISSSDGEPLSRMDSEDSISSTLMD
MDSTASSGRSTPAMMNGQGSTTPSTKSIAYNCCWDQCQTCFNSSPDLAEHIRSFHVDGQR
GGVFVCLWKGCKVYNTPSTSQSWLQRHMLTHSGDKPFKCVVGGCNASFASQGGLARHVPT
HFSQQNSSKVSSQSKVKEESPSKACLNKRKRLKNKRRRSLLLQMTGGEAIHQQVTKARPH
DFFDAQTMDAIRHRAICLNLATHIESLGNGHSVVFHSTVIARRKEDSGKVKILLHWTPED
ILPDVWVNENDRPQLKTKVVHLSKLPQDTAVLLDPNIYSLLIPYDISTLDSPDKLKPEMT
FEAITLKHNPCTICHLQKRAFINIQQLEPTKD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacttcatccgatagcgctgagcaagactccccctcacccagcaacgaaaac
ggggcgccaccgccaggtgagaccgaggacgagctgcggggcctgcagcttccagaaccg
aagcagagcgacgaagagaaaatggaagagggaggagagggaaagggtgagagagaggtt
aggggagacggggacagaaaagctgctgcagaagaagaggatgaagaggaggagataggt
agcgtgagcgccggtggcgaggaggagacctctgagcagcaaagcccggctagcagcagc
gagaccggggacggcccggagaaagagctcaaacaggatcaaagcggggagttcgagtcc
ggagactgcaatcagaagagcaaagctgcagaggacaccctcgacaagggcaacaccacg
ggcggcgtagtcagcgagcatgctaacaagagacgggccagtgtggaaatatcatcctcg
gacggggagcccctaagccgcatggactctgaggatagtataagcagcaccctaatggac
atggacagcacagcgtcgagcgggcgatcaacgccggcaatgatgaatggccaaggaagc
acgacaccatccaccaaaagcattgcttacaactgctgctgggaccagtgtcaaacctgc
ttcaactccagcccagacctggcagagcacatccgctcctttcacgtggatggacaacgg
ggaggggtttttgtctgtttatggaaaggctgcaaagtatataacacaccgtctaccagt
caaagttggctgcagaggcacatgttgacgcacagtggagacaaaccatttaagtgcgtg
gttggcggatgtaatgccagttttgcgtctcagggcggactggcccggcatgttcccacg
cacttcagccagcagaactcctctaaagtctccagccagtcaaaggtcaaggaagagtct
ccgtccaaagcgtgcctgaacaagcgcaagaggctcaagaacaagcggcggagatcattg
ctattgcagatgactggaggagaggccatacaccagcaagtgaccaaagcaaggccacat
gacttctttgacgcacaaacgatggatgccatacggcatagagctatctgcttgaacctc
gcgacgcacatagaaagcctggggaatggacacagtgttgtatttcatagcacagtaata
gcaagaaggaaggaagactctgggaaggtgaaaatcctgctccactggacacccgaggac
atcttgccagatgtgtgggtaaatgaaaacgaccggcctcagctaaagaccaaggttgta
cacttgtcaaagctaccacaagacactgctgtgctattagatcctaatatttacagccta
ctgattccctacgacatcagcactttggactctccagacaagctcaaacctgaaatgaca
tttgaagccattactcttaagcacaatccctgtaccatctgtcaccttcagaaaagggcc
tttatcaacattcaacaacttgaaccaacaaaagattag
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