Polyodon spathula (Mississippi paddlefish): 121320103
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Entry
121320103 CDS
T07273
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121320103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121320103
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121320103
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GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
PTR2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
121320103
NCBI-ProteinID:
XP_041114256
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Position
8:49196209..49225498
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AA seq
689 aa
AA seq
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MMEPANVTPSLPTVASKRRRRCCSKLKMFLMALSFAYFAKAFQGSYMKSSITQIERRFNI
PSSLIGLIDGSFEMGNLLVIAFVSYFGAKLHRPKLIGAGCLLMALGSFVTAIPHFIMGKY
EHETSIAHSVNLTTDILPCQSNQAITSDEAANSEISVAECQKEASSSMWIYVFLGNMLRG
IGETPVMPLGVSYVDDFAREENTAFYLACIQTVGILGPVFGYMLGSLCAKLYVDIGFVNL
STVTINLKDSRWVGAWWLGFLVAGIVMLLASIPFWFLPRSLPKQGGGKKNNSTQEEKRGS
KTKKQEHAVDFSQMTKDFLPSLKSLFCNPVFFCILCVSVIQVNAFIGLITFKPKFIEQTY
GQSPSKAVFLIGILHLPAVALGIFTGGFVLKKLKLTVIGAARVTIGASFISFLLSLSYYG
LSCENAKVAGLTVSYEGLSNVSYQENTLLSQCNSECACSVKYWDPVCADNGMTFVSPCLA
GCKTSTGTGKQMVFHNCSCVAMGAESKNTSVVLGQCARGEDCGTMFTYYLVVSVIGAYIS
ACGATPGTIILLRSINPELKSLALGILTFVIRTLGGIPSPIYFGALIDMTCLKWGSDKCG
GRGACRMYDSNAFKAIFLGLIYGLYCLSYLLWFVLYTLLKRRFQENQTDNMSEDEGKANL
KETEDTGSHKDCHEIMPKEEDLLERESGI
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatggagccggccaacgtaaccccatcattgccgacagtcgcaagcaagaggcgaagg
cgctgctgctccaaactcaagatgttcctgatggcattgtcttttgcctactttgcaaaa
gcatttcaagggagttatatgaagagctcaatcacacaaatagaaagacgcttcaatatc
cccagctccttaattgggttaattgatggaagctttgaaatgggtaatttgctagttata
gcttttgttagttactttggagccaaactgcacaggcccaaactaattggggcaggctgt
ttgctgatggcccttgggtcctttgtgactgcaatacctcacttcataatgggaaaatac
gagcatgaaacatcgattgcacattcagtgaatttaactacagacatcttaccctgccag
tcgaaccaagccattacctcagatgaagctgctaactcagagatctcagtggcagagtgt
caaaaggaagctagttcatcgatgtggatctacgtgtttcttggaaacatgttacgtgga
attggtgaaacaccggtcatgcccctaggggtttcctacgtggatgattttgcaagagaa
gaaaacacagctttttacctggcctgcatacagacggttggaattctgggacccgtcttt
ggatatatgctggggtcactgtgtgctaaactgtatgtggatatcggatttgtaaatcta
agcactgtgacgattaatctgaaggattcacgctgggttggcgcttggtggctggggttc
ctggtggctggaatagttatgcttcttgctagcattccattctggttcctgccgaggtcc
cttccaaagcaaggtggaggcaagaagaacaactcaacgcaggaggagaaacgtggatcc
aaaaccaaaaagcaagaacatgctgtcgatttttctcagatgactaaagatttcctacct
tcactgaaaagcctgttttgcaaccctgtatttttctgcattttgtgtgtgtctgttata
caagtcaatgcttttataggactcatcaccttcaaaccaaagtttattgagcaaacgtat
ggccagtctccctccaaagcagtatttttaataggaatcctgcacttgcctgctgtggca
ctcgggatcttcactggtgggtttgtcctgaagaaactcaagttaactgtgattggagct
gcaagagtgacgattggagcctctttcatctccttccttctcagcctgtcgtattatgga
ttaagctgtgagaatgctaaggtagcaggactcacagtctcctacgaagggttgagcaat
gtttcatatcaggaaaacactttgctgtcccaatgcaattctgaatgtgcctgctctgtg
aaatactgggatcctgtctgcgctgacaatggaatgacattcgtgtccccttgtctcgct
ggttgcaaaacttcaactggaactgggaaacaaatggtctttcataactgcagctgtgtt
gcgatgggtgctgaatctaaaaacacctcagtggttctgggtcagtgtgccagaggagag
gactgtggaacgatgtttacctactatttggttgtttctgtaattggtgcttacatttct
gcttgtggtgccaccccagggacaatcatactccttaggtctattaatccagagctgaaa
tccttagccctcggaatcctaacctttgttataagaacactgggtggaatcccttctcca
atttattttggtgctctcatagacatgacgtgcttaaagtgggggtccgacaaatgtgga
ggcagaggggcttgcaggatgtacgattcgaatgcattcaaggccatcttccttggatta
atttatggactgtattgcctgtcatacttgctgtggtttgtcttgtacacgctgctgaag
aggcgctttcaggagaatcaaacagacaacatgtctgaagatgaaggcaaggcaaactta
aaggaaacagaggacactggcagtcacaaggactgtcatgagatcatgccaaaggaggaa
gatctgctggaaagggagagcggtatttag
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