Polyodon spathula (Mississippi paddlefish): 121320104
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Entry
121320104 CDS
T07273
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121320104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121320104
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121320104
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
SBF
DUF4199
Motif
Other DBs
NCBI-GeneID:
121320104
NCBI-ProteinID:
XP_041114264
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Position
8:49232773..49256579
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AA seq
701 aa
AA seq
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MANNVGEPAGQQTEMDKPCIRECKITKRTCCSQLKMFLVALSFVYFAKALSGTYMKSSIT
QIERRFDLSSSYIGLIDGGFEMGNLLFLAVVSHFGVKFHRPKLIGAGCLLMCLGSCLTGM
PHFFMGRYKYETVIRTSVSVTRNTSPCLPYQNQSGGAVVPGKSLEGLNAGCKKEAGSYMW
VYVFLGNALRGIGETPVMPLGISYIDDFAKAENSAFYIACLQTVSLLGPMFGFLLGSLCA
KLYVDIGFVDLESVTITPRDARWVGAWWLGFLVSAVIMLFASFPFWFFPKSLPKQGEDKM
EQLECLKERLRETTNARPLPLKLADIAKAFLPSLKKLLCTPAYFLLLCGSILKFNSFIGL
VTFKPKYMEQQFGQSASKANFLIGVLNLPAVAIGIFIGGFLMKKYKLGVVEGAQLSFGTS
FVSFLLLMTQFGIKCENSKVAGFTVSYTGTSQISYNEKTLLSACNSGCTCSLKQWDPVCA
DSGVTYVSPCLAGCKETTGFGKTTVFHNCSCVAFSAPPSENISVILGQCPRKDDCRRSFI
YYMAVSVIGSFISALGATPGYIVTIRCIKPELKSLAVGIQSLVTRTLGGIPAPVYFGILI
DSTCLKWGSKKCGGRGACRMYNSDAYRLIYLGLITALSGSSYFFMIAVILLLRKQFKRVE
KKTQDDADGHTEIEFTHVDEAELNHDMKLMDCLHEAGASPE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaatgtaggagaacctgctggacagcagacggagatggacaagccttgtatc
agggaatgcaagataacaaaacggacatgctgttcacaacttaagatgtttttagtggcc
ctgtcctttgtctactttgctaaagcactgtcagggacctacatgaaaagctccatcaca
cagatagagagacgttttgatctctccagctcttacattggtctcattgatggcggcttt
gaaatgggtaacttgctgttccttgctgttgtaagtcactttggagtcaaatttcaccga
ccaaaactgataggagctggttgtctgctgatgtgtctgggatcctgtttaactggaatg
cctcacttttttatgggccgctataaatatgaaacagtaattagaacttcagtcagcgtc
accagaaatacctcgccgtgtctaccctaccagaaccagtctgggggtgctgtggtacca
gggaagtctttagagggtttgaacgcaggctgtaagaaggaagcaggctcctacatgtgg
gtttatgtgttcctgggaaatgctttacgtggaataggggaaacacctgttatgcctttg
gggatttcatatattgatgattttgcgaaagcagagaattctgctttctacattgcttgc
ctacaaacagtctcactcctcggcccgatgtttggctttctgcttggatcattatgcgca
aaactgtatgttgacataggatttgtggatcttgaaagtgtgaccataacccccagggat
gcccgctgggtgggagcctggtggcttggattccttgtatccgcagtcatcatgctgttc
gccagtttcccattctggttcttcccaaagtctcttccaaaacaaggggaagacaaaatg
gaacagttggaatgtctcaaagaacgactccgggaaacaacaaatgcaagacctctccca
ttaaaactggctgacattgcaaaagcttttcttccgtcgctgaaaaagctgttgtgtact
ccagcatacttcttacttttatgtgggagcatcctaaagttcaattccttcattggctta
gtgaccttcaaaccaaaatatatggagcagcagtttggacaatctgcatccaaagctaac
ttcttaataggagtacttaatttacctgcagttgctattgggattttcatcggtggattt
ctcatgaaaaagtacaagctcggtgtggttgagggtgctcagctgtcattcggaacctct
ttcgtgtctttccttctattgatgactcagtttggaataaagtgcgagaactccaaggta
gctgggtttacggtatcgtatactggaacaagccagatctcatacaatgaaaaaacgcta
ctctcggcttgtaacagcggctgcacttgctcactgaagcaatgggaccctgtgtgtgca
gacagtggggttacgtatgtgtctccatgccttgctggctgtaaagagacaacaggattt
ggaaaaactacagtctttcacaattgcagttgtgtggcattttcagctcctccatctgaa
aatatctcagtcatacttggtcaatgcccaaggaaagatgactgcaggagaagcttcatc
tactacatggccgtgtcagtcataggttcctttataagtgccctgggggccacgccggga
tacattgtgacaatcagatgcatcaaaccggaactgaagtccttggctgtaggaattcag
tctttggttacaagaaccctgggtggcatcccggccccagtgtattttggaatactgatt
gattccacctgcttgaaatggggcagcaagaagtgtggtggcagaggagcttgcaggatg
tataattcagatgcatacaggctcatttacctggggttgatcactgctttgagtggctca
tcctatttcttcatgattgctgtcattctgttgttgaggaaacagttcaagcgcgtggag
aagaagacccaagatgatgcagacgggcacactgagatcgaattcacccacgtggacgaa
gctgagttaaaccatgacatgaaactgatggactgcctgcacgaagcaggagccagtcca
gagtaa
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