Polyodon spathula (Mississippi paddlefish): 121320105
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Entry
121320105 CDS
T07273
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121320105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121320105
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
121320105
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
GBD_ELAPOR1
Motif
Other DBs
NCBI-GeneID:
121320105
NCBI-ProteinID:
XP_041114268
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Position
8:49286727..49334459
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AA seq
701 aa
AA seq
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MTVETRPEGFPDPPLKKELPPLEDPSEAKTRTCCTRNVKMFLVALSFTYFSKALSGSYMK
SSITQIERRFEIPSSVIGVIDGSFEMGNLLVLPLVSYFGAKFHRPKIIGAGCMLMSIGTL
LMALPHFLMGHYKYETTISASTNSSTASFPCSQDPGQLTELEAQQQYSRIAGCEHDGGSL
MWVAVLLGNVLRGVGEATITPLGISFIDDFASPENSAFYIGCLHTIAVIGPLFGFTLSAF
CARLYVDIGFVDLGSIAISMKDSRWVGAWWLGFIIAGGTSLLSAFPFFFLPKTLPKEAGP
EKDSSTTAEQNLLQGNQQTNATDEQPKLIDVAKDFLPSLKRLLTNKIYILYLTANIIMVN
GVIILITYTPKYLEQQFGESASKTNFLIGVTSMPAVSLGIFFSGLIMKKFKLDLLGAVKV
GLGTAVLGSLCILPYFALACENTEIAGLTVSYAGTGISDLESRVLVACNSGCGCPVNQWE
PVCGENGMTYVSPCFAGCNISRGSGKNTTFHACRCIEAFPKSGSGNFSAVLGQCPREEKC
SRMFIYYLVFLSLSFFILSLGSMPIFIVNLRCVDPELKSLSVGMYTLALRAFGGIPAPIY
FGALIDSTCMKWGTKKCGGHGACRVYNNVSFRLLFIGLILGLRLLGCIFLGFVIIQMKKF
TRDHRKTSTEVKVFLKQDMRNSVLPEQKPTGLSEKEVETSA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggagacgagaccagaggggtttcctgatcctcctttaaagaaagaactgcct
cctcttgaagatccatcagaagcaaaaacaagaacatgctgcactcgcaatgtgaagatg
tttttggtagctctatcgtttacatacttttccaaagcattatctggaagctacatgaaa
agttccattacccagatagagaggagatttgagattcctagttctgttattggggttatt
gacggcagctttgaaatgggtaatttgctggtgttaccattggtaagctactttggagca
aagtttcacagaccaaaaataattggtgctggatgcatgctgatgtctattggaacatta
ctcatggcgctacctcatttcctcatgggacactataaatacgaaacaacaatatcagct
tcaactaactccagcacagcgagcttcccgtgttcacaagacccaggccagcttactgag
cttgaggcccagcaacaatattccagaatagcgggttgtgaacatgatggaggctccctg
atgtgggttgctgtgttgctggggaacgtgctacgaggggttggtgaagcaaccattaca
ccgctgggaatttcattcattgatgatttcgccagcccagaaaactcagccttttacatt
gggtgcctccataccattgcagtgattggacctctttttgggttcacgctgagtgcgttt
tgtgcaaggctgtatgtagacatcgggtttgttgatcttggaagtattgccatatcaatg
aaggattcccgttgggtcggtgcttggtggcttggctttataatcgctggaggaaccagc
ttgctttctgcatttccattcttttttctgcccaaaactctgcccaaagaagcaggtccg
gaaaaagattccagcaccacagcagaacaaaatctgttacaaggaaaccagcaaacaaac
gcaacagacgaacagcccaaactcatagacgttgcaaaggattttttgccatccttgaag
cgtctgctcacaaacaagatctacattttatatctcacagcaaacattataatggtcaat
ggggtcatcattttgataacgtacacaccaaaatacttagaacaacagtttggagaatct
gcatccaaaactaactttttaataggtgttaccagcatgccggctgtttccttggggatt
ttcttcagtggtcttatcatgaagaagtttaagctagatctcctgggagcagtcaaggtg
ggactaggcacagctgtccttggcagcctctgtatcttaccttattttgcattggcttgt
gaaaacactgagatcgctggactcacagtttcctatgcaggaacagggatttcagacttg
gagagcagagtgttggtggcctgtaactctggctgtggttgcccagtgaaccagtgggag
ccagtgtgcggagagaatgggatgacgtacgtttccccttgctttgctggttgtaacata
tccagaggaagtggaaaaaacacgacgtttcatgcctgcagatgtattgaagcttttccc
aagtcaggatctgggaatttctctgcagttctgggacaatgcccacgagaggagaagtgt
tccagaatgttcatatattacttggtgttcctgtccttgagtttcttcattctttctctg
ggaagcatgccgatattcattgtaaatctcaggtgtgtggatccagagctgaaatcacta
tcggtgggaatgtacactctggcactgagagcatttggtggaatcccagctccaatttat
tttggagccctgattgactcaacatgcatgaaatgggggaccaagaagtgtgggggtcat
ggagcatgcagggtgtacaacaacgtctcattcaggctcctcttcattggattaatattg
ggcctgcgcttgttgggttgcatctttttggggtttgtcatcattcagatgaagaaattc
acaagagaccacaggaaaacttccactgaagtcaaagtctttttaaagcaggacatgaga
aacagtgtccttcctgagcagaaacctactggtctgagtgagaaggaagtggaaaccagc
gcctaa
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