Polyodon spathula (Mississippi paddlefish): 121320115
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Entry
121320115 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family C member 9-like isoform X1
KO
K05033
ATP-binding cassette subfamily C (CFTR/MRP) member 9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121320115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121320115
04147 Exosome [BR:
pspa04147
]
121320115
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
121320115
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121320115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
AAA_25
AAA_7
PBP1_TM
DUF5553
Motif
Other DBs
NCBI-GeneID:
121320115
NCBI-ProteinID:
XP_041114284
LinkDB
All DBs
Position
8:complement(49537459..49609484)
Genome browser
AA seq
1561 aa
AA seq
DB search
MPLSFCGNDNASAYSVDDGVLDNGCFVDALNLVPHVFLLFITFPILFIGWGSQSSKVQIH
HSTWLHFPGHNMRWILTFTLLFVHVCETAEGIVSDVYMKSCHLHLFLPAFVGFIAATTSV
VYYHNIETSNFPKLLLALFIYWVLAFVTKTIKLVKYYEHNVGVQHLRFCITAMLVILYAL
LMAVEINVIRVRRYVFFANPQKVKPSEDLQDLGVRFLQPFVNLLSKATYWWMNPLIIGAH
KRPIDLKKIGKLPIAMRALTNYIRLKDAYEEQRKMVTDQADKSPSIWRSMYRAFGRPILL
SSTFRYLADLLGFAGPLCIYCILLRLDDRKSPQMSEQKNVTTSDLIVYYVSSHELLENTF
ILAVLLFLALILQRTFLQASYYVTIETGINLRGALLAMIYNKMLRLSTSNMSMGEMTLGQ
INNLVAIETNQLMWFLFLCPNLWAMPVQIIMGVVLLHYLLGFSALIGACVIVLLAPIQYF
IATKLAEAQKSTLDYSTDRLKKTNEILKGIKLLKLYAWENIFCSSVEETRVKELTSLKTF
ALYTSLSIFMNAAVPIAAVLVTFMTHAYTSSTELSPAVAFASLALFHILVTPLFLLSTVV
RFTVKAIVSVQKLGEFLLSDEIGDDSWRNGETSVSLESCKKHPGAHTKAINRKLPLRYQL
DSFEQPSRRQPRPTETEDIAVKVNNGFFSWGSNVATLSDINMHIPTGQLTMIVGQVGCGK
SSLLLAMLGEMQTIGGKVHWSNKNRNSVAYAAQKSWLLNATVEENITFGNPFNKQRYKAV
IDTCSLQPDIDLLPYGDQTEIGERGINLSGGQRQRICVARALYQNTNIVFLDDPFSALDI
HLSDHLMQEGILKFLQDDKRTVVLVTHKLQYLIHADWIIAMKDGTLLREGTLKDIQNNDI
ELYKHWKTLMNRQDQELEKDTDVADSQTALERKNLRRALYSREAKSQIDDEDEEEEEEED
DEDTMSMMTSRRSKIPWRVCWNYLTSGGFLLLFMMIFCNLLKHSVIVAIDYWLATWTSSA
QNSSMSAHSSVNGTLTDTAPFDLSYYTTGFSILCSSGIVLCLIASLTVEWMGLFAARNLH
HNLLNKIILAPIRFFDITPLGQMLNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGVIA
FVTPFFLIAMLPLGIAFYFIQKYFRVASKDLQDLDDSTQLPLLCHFSETAEGLTTIRAFR
HEARFKQRMLELIDTNNVAYLFLSAANRWLEVRTDYLGAVIVLTAAVTSICTSENGLQSG
LVGLGLTYALTVTNYLNWLVRSLADLEVQMGAVKKVSGFLSTESENYEGDLSQVPEDWPQ
QGEIKIQNLSVRYDSVLKPVLKHVNAYINPGQKVGICGRTGSGKSSLSLAFFRMVDMFQG
KIIIDGIDISKLPLPTLRSRLSIILQDPVLFSGSIRFNLDPERTCTDDRLWEALEIAQLK
NMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATEHILQ
KVVMTAFADRTVVTIAHRVSSILEAEQVLVFCEGILVECDSASSLLSQDDSLFTLLVKTH
K
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgcccctctcgttctgtggtaacgataatgcttcagcctacagtgtggacgatggggtc
ttggacaatggctgttttgttgatgctctcaacctggtcccccatgtcttcctgctgttc
atcactttccccatattgttcattggctgggggagtcagagctctaaggttcagatccac
cacagcacctggttacacttccctggacacaacatgaggtggatcctaacatttacactt
ctgttcgtccatgtgtgtgagacagctgaagggatcgtttctgatgtgtatatgaaatcc
tgccacctgcaccttttcctgcctgcattcgtggggttcatagctgccactacgtctgta
gtctactaccacaacatcgaaacctccaacttccccaagctgctcctggccttgtttatc
tactgggtgctggcgtttgtcacgaagaccatcaagctggtgaagtactacgagcacaac
gtgggggtccagcacctgaggttctgcatcacagccatgcttgtcattctgtatgcactg
ctgatggcagtggagatcaatgtgatcagggtcaggaggtatgtcttttttgcaaaccct
cagaaagtaaagccctcagaggacctgcaagatttgggcgtcagattcttgcagccgttt
gtaaatttactgtccaaggccacatattggtggatgaacccactgatcatcggcgctcac
aagaggccgatcgacctgaagaagatcgggaaactgcccattgccatgagggctttgact
aactatatacgcctgaaggacgcctacgaggagcaaaggaagatggtgacagaccaggct
gacaagagtccgtctatctggaggtccatgtaccgagcgtttgggaggcccatccttctt
agcagcaccttccgctacctggccgacctgctgggcttcgctggaccgctctgcatctac
tgcatcctcctgcggctcgacgaccggaaaagcccccagatgagtgagcagaagaacgtc
actacaagtgatttgattgtctattacgtgtcatctcatgagctgctggagaacactttc
attctggcagtcctcctgttcttggctctaattctgcagaggacatttttacaggcctct
tattacgtgaccattgaaacaggaatcaaccttcgtggggccttgctggctatgatatac
aacaagatgctgcgcctctccacttccaacatgtccatgggcgagatgaccctggggcag
atcaacaacctggtcgccatagaaacaaaccagctcatgtggtttttgttcctgtgccca
aatttgtgggctatgcccgtgcagatcatcatgggagttgtcctcttacattacctactg
ggtttcagcgctctgattggtgcttgcgtgatagttctcctagctccaattcagtacttc
atagcaaccaagctggctgaagcacagaagagcaccctagactactccacagacaggctg
aagaagaccaatgagattctgaagggcatcaagctgctgaagctgtatgcctgggagaac
atcttctgcagtagtgtggaggagaccagagtgaaggagctcaccagcctcaaaacgttt
gcgctctacacctcgctgtccattttcatgaatgctgccgtccctatagcagctgtgtta
gtgactttcatgacccacgcctacaccagttctacagagctgagcccagctgtggccttc
gcatccctagccctgttccacatcctggtcacgccactcttcctgctgtccactgtggtc
aggttcacggtcaaagccatcgtcagtgtccagaagctgggagagtttctgttgagtgac
gagataggcgatgacagctggaggaatggagagacctcggtgtctttagagtcctgtaag
aaacaccccggagctcacaccaaagccataaacaggaagctgcccctgaggtatcagctg
gatagcttcgagcagccgtcccgaaggcagccacgtcccacagagactgaagacatcgcg
gtcaaggtgaataacggattcttctcatggggaagcaacgtggcaacattatcggacata
aacatgcacatccctacaggacagttgactatgatcgtgggtcaggtaggctgtggaaag
tcctctcttctcctggcaatgcttggggagatgcagacgattggtgggaaagtgcactgg
agcaataaaaacaggaactctgtggcgtatgctgctcagaagtcttggctgctgaacgcc
acagtggaagagaacatcactttcgggaatccttttaacaagcagagatacaaagctgtt
atagacacatgctctctgcaacctgacatcgacctgttgccctatggagatcagacggag
ataggagaaaggggaatcaacctgagtggaggccagagacagaggatctgtgtggcacgg
gccctctatcagaacacaaacatcgtgttcctggatgaccccttctctgcactggatatc
cacctgagtgaccacctcatgcaggaggggatcctcaagttcctgcaagatgacaagagg
acagtggtgctggtgacacacaagctgcaatacctgatccatgctgactggatcattgct
atgaaggatggtactttgctaagagaaggaacgctgaaggatatccagaacaatgacatt
gagctctataaacactggaagacgcttatgaaccgacaggatcaagaattagagaaggac
actgatgttgctgacagccagacagctctggagaggaagaacctcaggagagccttgtac
tcaagagaggccaagtcgcagattgacgatgaagacgaagaggaggaggaggaggaggat
gatgaggacaccatgtcgatgatgaccagccggcgctcaaagatcccctggagggtttgc
tggaactacctgacctcagggggcttcctgctgctcttcatgatgatcttctgcaacctg
ctcaagcactccgtcatcgtcgccatagactactggctggccacctggacctccagcgca
cagaacagttccatgagcgcacacagcagtgtcaacggcacgctcacagacacggctcct
tttgatctctcctactacaccactggcttcagtattctttgcagctctgggattgtactc
tgcctcatcgcctcgttgactgtggaatggatgggtctgttcgcagccagaaacctccat
cacaatcttctcaacaaaatcattctagcaccaatcagattttttgacatcacacccctg
ggccaaatgctgaaccgcttttcggctgacaccaacatcattgatcagcacatccctccg
actctggagtccctgacccgctccaccctgctctgtctgtcagctatcggagtcatcgcc
ttcgtcacgcctttcttcctcatcgccatgctgcccctggggatcgccttctacttcata
cagaagtacttcagggttgcgtccaaggacctgcaggacctggacgattccacccagctg
ccactgctctgccacttctccgaaaccgctgagggcctcaccaccatccgcgcattcaga
cacgaggcccgtttcaagcagcgcatgctggagctgattgacacaaacaacgtcgcctac
ttgtttctctctgctgccaaccggtggctggaggtcagaacggattatctcggtgctgtg
attgtactcacggctgctgtcacatcaatatgtacttctgagaacggacttcaatcagga
ctggtgggactgggactcacctacgctcttacagtgactaattacctgaactggttggtg
aggagcctggcagatctggaggtgcagatgggagcagtgaagaaagtcagtggcttcctg
agcacggaatcagagaactacgagggcgatctctctcaagttccagaggactggcctcag
caaggggagatcaagatccagaacctgtctgtgcgatacgactccgttctgaaaccagtg
ctgaagcatgtaaacgcatacatcaaccctggacaaaaggttggaatctgtggccgcaca
ggtagtggaaaatcctctctctccctggccttttttagaatggtggacatgtttcaaggg
aagattatcatcgatggaatagacatcagcaaactgcctctgcccaccctacggtccaga
ctgtccattatcctgcaggaccctgtgctgttcagcggctccattcggtttaacttggac
ccggagcgcacgtgcacagatgacagactctgggaggccctggagattgcccagctgaag
aacatggtcaagtcactgccgggcgggctagacgcggtggtgacggagggaggggagaac
ttcagcgtggggcagaggcagctcttctgtctggccagggcctttgtgcgcaagagcagc
atcctcatcatggatgaggccacggcttccatagacatggccacggagcacattttgcag
aaggtagtgatgacggcctttgcagatcgcactgttgttaccattgctcaccgggtgtcc
tccatcctggaagctgagcaggttttagtgttttgcgagggtattttagtggagtgtgac
tcagcgtccagcctgctgtcccaggatgatagcctcttcacccttctggtgaagacgcac
aagtag
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integrated database retrieval system
