Polyodon spathula (Mississippi paddlefish): 121320124
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Entry
121320124 CDS
T07273
Name
(RefSeq) protein NEDD1-like
KO
K16547
protein NEDD1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121320124
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121320124
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
121320124
Microtubules and associated factors
gamma-tubulin ring complex
121320124
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
121320124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
eIF2A
Beta-prop_IFT122_1st
WD40_like
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_WDR35_TULP_N
KNTC1_N
Beta-prop_SPT8
Frtz
Beta-prop_SCAP
Beta-prop_NWD2_C
VPS8_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
121320124
NCBI-ProteinID:
XP_041114317
LinkDB
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Position
8:complement(50339292..50361269)
Genome browser
AA seq
645 aa
AA seq
DB search
MEESIRLVSSGEDIKIWNSSSMTVVDQFNPHASTHPVSRVCWSTNNHFLVSACSSGDKIV
VSSCKSSPVPVLDLAEGKRQTCVNLNSTSQFIVSGGLDNTVNIWDLKSKKLHRSLKDHKD
VVTCVSFNGNDSYIASGSTSGEIILHSITTNLSSTPFGHGSTQPIQDLKYSSVKKSLMGS
VSDSGTVVLWDANTQKPQHTFESAHKAPACGLCFSPANELLFVTVGLDKRIICYDTSSKK
VLRGMVAESPLTAIDFMPDGAVLAVGSSRGKIYLYDLRMLTSPVKTVSAHKTSVQCLKFQ
HSPSQTKSCSKTSASKSSTALSASTYKRATVQSSTREALQKPAAPAAQHTSGTPASGERG
DGRQHNSEMPRSTSLDVFPSKETDSLKSINRFPSLEKFDTVGRNSLSDVLSPVRDDYTTQ
KGSGDCSKGDGLDFLSQFTSGLPARRAPLGTSAVQTSPFNMFGDSPQPVREEEEEPKRSQ
AQLGLQDTKTISSSSTTEPVSMNTPGMLASFKSPDMREKDVQYESPVNGALPSVPNLSPS
PGVSAAGVASSLSERIADTIGSDSSSAPLTSIQIHFIRNMIQETLEDFRESCHRDIVNLQ
VEMIRQFYIQLNEIHSLIERYSVTDVLVAEIEKLKEENKKLRTSF
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagtatccgcttggtgtcgtcgggggaggatataaagatctggaactcatcg
tcgatgacagtagtggatcagttcaacccccatgcctccactcaccctgtctccagagtc
tgctggagcaccaacaatcatttcctggtcagtgcctgttctagtggggataaaattgtg
gtatcaagctgcaagtcctccccagtccctgttctggaccttgctgaagggaaaagacag
acctgtgtcaatttaaattccacgtcccagttcattgtgagcggtggccttgacaacacc
gtcaacatctgggatctgaaatctaagaagctgcaccgttccctcaaggatcacaaggat
gtagttacctgtgtgtccttcaatggaaacgatagctacattgcttctgggtcaacaagt
ggtgaaattatattgcacagcattaccaccaacctgtccagcactccttttggtcatggg
agcacacagcctatccaggatttgaaatactcgtctgtgaagaagtccctgatgggcagt
gtgtctgacagtggcacagtggttctgtgggacgccaacactcagaaaccccagcacacc
tttgaaagcgctcacaaggctcctgcctgcgggctgtgcttctctcccgctaacgagctg
ctgtttgtcaccgtggggttggataagaggatcatctgctatgacacttccagcaagaag
gtcctgcgaggcatggtggcagagtcccccctcactgcgatagacttcatgccagacgga
gcggtcctggcggtgggctcgtcccgagggaagatctacctgtatgatctcaggatgcta
acgtctccagtgaagactgtgtccgcccacaagacgtctgtgcagtgcctaaaattccag
cactccccctcccagaccaagtcatgtagcaaaacttctgcaagcaagtcctccactgct
ctgtctgccagcacctataagagagctacagtccagagcagcacaagagaggctctccag
aaaccagcagcaccagcagcccagcacacatccggtacaccggcatctggggagagagga
gacgggaggcaacataactcagaaatgcctcgcagcaccagcctggatgtcttcccatca
aaagagacagacagtctgaagagcattaaccgctttcccagcttggaaaaattcgacacc
gtggggagaaacagcctgagtgacgtgctctctccagtgcgagacgattacaccacacag
aaaggaagcggagactgctcgaaaggagatgggctggatttcctctcccagttcaccagc
ggactgcctgcccgcagagctcctctggggacttccgcggtgcaaaccagccctttcaac
atgttcggggactccccgcagccagttcgagaggaggaggaggaacccaaacgaagccag
gcacagctgggactccaggacaccaagacgatttcaagcagctccaccactgagccagtg
agcatgaacactccagggatgctggccagctttaaatctccagacatgagggagaaggat
gtccagtacgaatctccagtgaacggagcgctgccttctgtaccaaatttgagcccaagc
ccgggagtttctgctgctggagtggcttcctcgttgtcggagaggattgccgataccatc
ggcagtgacagcagcagtgcgccgctgacctccattcagatccacttcatcaggaacatg
atccaggagacgctggaagacttcagagaatcctgtcacagggatattgtgaacctgcag
gtggagatgatcaggcagttctacatacagctgaatgaaatccactctctgattgaaagg
tactccgttaccgatgtgcttgtggcagaaattgaaaagctgaaagaggaaaacaaaaaa
ctcaggaccagtttctga
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