Polyodon spathula (Mississippi paddlefish): 121320125
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Entry
121320125 CDS
T07273
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121320125 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121320125 (tubgcp6)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
121320125 (tubgcp6)
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
121320125 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
121320125
NCBI-ProteinID:
XP_041114318
LinkDB
All DBs
Position
8:complement(50370296..50402170)
Genome browser
AA seq
1947 aa
AA seq
DB search
MTSSSSITQLVSELCESHLAGLSWKGVQGGAGRVSREVLRRKLKRRAYEALLPRLFHDPP
VAKPNAPLASRGGAPPLIPARNKVLMLSFNLRVSGHGGKAERLEELLGELRGGSETDAVL
DLLVHLAGSVPPQPPSHSRDFFCRSRKVGRRLELGGYEGSELRLLEAQAWSLVCGEECRA
AESLHRTLAAMEASPGTGLIALGPLGMGETEGEERYERETRLSLFGALVHTRTADMDIRL
DLPPVPSNAELTGLAIRVPPSLDQSEDEGFQSASNLSPDSQSEPSLTPDIDVWNAVLSYE
PSQSRCWERVGCPPGKKEEPYLTEAGREAFDRLYQVREGEIRLLSTTLPQTPPLQPQSEA
ELVKKTLHMLIGVASATFSLDQSALGFHVMPGVYVSGTSPDSVASLLEELAEYGTHYWRL
SRFSLQPVLDSSYKKGLVFQAFTGGVRRYLHYYRACVLSTPPTLSLLTIVFLFRKLGRQL
RYLSELCWCGGGTGAQSLNRGTAASFPTGVKLLSYLYNEAQNNCSNENYPVLLSLLKSSC
EPYTRFIYDWVYSGVFRDVYGEFMIQVNEDYLSFRDKHFWTQGYLLISKDVEDCVPVFLR
HIANEIYVSGKTINLLRVCCPRHYICWSELPVPRIAVTFSLQELEEIQRDCGVYRGRMER
IARYSAINREEKALRTELARQELIVQVRETTAKALETIRGRQVSQRLAQETKKRERFQEL
KQQLVVEQERRSAAQQQEADSDFGFAREIRDRERRLQALEEQLESQARRELIEHYSRLSE
EAAARERRALWKVQRLRLGTERNSFLQLQQRHIQAMLEKFPLGEHREQLDIIPKGDSPRR
LPAGGKGDSGEQGAQEILKHQSSDPSILREHPPALEAEPQESENRTPDSVQEAPGDPHPY
PTGPLELGEQAPQARLESPCPLDIHDFLPKQTPDLPAGTCPLVSAVDAALLDIGSELPEG
ASGLQQEYDFSAPYSPLQGVRLRLRWNTHQHTSQANIQLGQYASDMEPSKPRASIHGHVS
EANIKVGQNISEVQVAKPVVNVHGHSSESNIQLGQYASNMETSKPRASVHGHVSDATIQL
GDESKPTVLNERQTLQAITEFSEGDPDPGISEPVLELHDQAPAVQLGEHMPVTELPGLMA
SVPGQASEENLKIMQKASERELSLPHVHIQGHASEAHIKLGGYMSDTELSKPRVNIHGHA
SEGSIKVGEYVSDADQVQPHLSIHRHASDSSIKVGGYVSDSEQASPHWSVHGHASDSSIK
VGGYVSDSEQASPHWSVHGHASDSSIKVGGYVSDSEQASPHWSVHGHASDSSIKVGGYVS
DSEQASPHWSVHGHASDSSIKVGGYVSDSEQASPHWSVHGHASDSSIKVGGYVSDSEQAS
PHWSVHGHASDSSIKVGGYVSDSEQASPHWSVHGHASDSSIKVGEYTADEEPSRPRWSSH
GHASQSHFRLGKLLSNVEPFKPCSSDALSSIPEENTELGTRPGAENETSEWARRGEQGAL
TQSEEAAVLQRGLTAEQLEASVESLLCQGPPWGVGEGLGPEWPRERAYLHSLAAQYQVEQ
YQDSYNLMTAAPDSHLLHQVTAGPYAFPVDPSLRRATDTTAVQLSEMVSLPVLMKHSVTA
PLLTHVSLVNKAIVDYYFMELNMERHCEALRHFLLMEDGEFAQSLSDLLFEKLGSGQTPG
ELLNPLVLNSILNKSLQYSLHGDSQLAANLTFALRFLPESFHPHAPDALACLELRYKVDW
PLNIVITDSCMNKYNRIFSFLLQLKHMVWTLRDVWFHLKRAAMVKGAGSSVQFRQLQLYR
HEMQHFVKVIQGYIANQILHVTWSEFRTKLGSAANLDDIHHTHADYLNRAIFRGLLTEKA
APVMNIIHSIFSLILKFRAQLISQPWSSQQGAVEHPSFGVMQQSYRTFKYYSHFLFKVVT
KLVNRGYQPHLEDFLLRINFNSYYQDS
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgactagcagcagcagcatcactcagctggtcagcgagctgtgtgagtctcacctggct
ggtttgtcctggaagggggtgcagggaggtgctggccgagtctccagggaggtgctcagg
agaaagttgaagcggagagcctatgaagccctcctgccccggctcttccatgaccctccg
gtggccaaacccaacgcccccctcgcctcccgtgggggtgctcctcccctgattcctgcc
aggaacaaggtgctgatgctgtccttcaacctgcgcgtgtcgggccatggagggaaggcg
gagcgactggaggaactgctgggggagctgcgggggggctcggagacggacgctgtgctc
gacctgctggtgcacctggccggctccgtgcccccccagccccccagccacagcagagac
ttcttctgccgcagccgcaaggtgggccggcgcctggagctggggggctacgaggggtcc
gagctgagactgttggaggcccaggcctggtccctggtgtgcggggaggagtgcagggct
gccgagagcctgcacaggaccctggctgccatggaggcctcccctgggactgggctgatc
gctctggggccgcttggcatgggcgagactgagggcgaggagcggtacgagcgagagaca
cgcctctcgctgttcggggccctggtgcacacccgcactgcagacatggacatccggctg
gacctgccccccgtacctagcaacgcggagctcaccgggctagccatccgggttcctccc
agtctagaccagtctgaagacgaggggttccagtcagcatcgaacctgagccccgactcc
cagtcagagcccagtctgacccccgatattgacgtgtggaatgctgtgctcagctacgag
cccagccagagccggtgctgggagagagtgggttgtccccccgggaagaaggaggaacct
tacctgacggaggcagggcgggaggctttcgaccggctgtaccaggttcgagagggagag
atccggctcctgagcaccaccctcccccagacaccccccctgcagcctcagagcgaggct
gagctcgtcaagaaaaccctgcacatgctcatcggagtggcctcggccaccttctcactg
gaccagtctgctttggggttccatgtgatgccaggggtgtatgtgtccggtacctcccca
gatagtgttgccagcctgctggaggagctggcagagtacgggacccactactggagactg
agccgcttctccctgcagcctgtcctggactccagctacaaaaagggactggtcttccag
gcgtttaccggtggagtgcggcgatacctgcattactaccgcgcctgtgtcctctccacg
ccccccacgctcagcctcctgaccatcgtgtttctcttcaggaagctgggacgccagctc
cggtacctctcagagctgtgctggtgtgggggtggaactggagcccagagcctgaacaga
gggactgcagcctccttccccacgggagtgaagctgttgtcttacttgtacaatgaggcc
cagaataactgcagcaatgagaactacccggtcctgctgtccctgctcaagagcagctgt
gagccctacacaaggtttatatacgactgggtgtacagcggcgtgttcagggatgtctac
ggagagttcatgatccaggtgaacgaggactacctgagtttcagagataaacacttctgg
acgcagggctacctgctgatctcgaaggacgtggaggactgtgttcctgtgttcctgcga
cacattgcgaacgagatctacgtcagtggaaagaccatcaacctccttcgagtctgctgc
cccaggcactatatctgctggtcggagctgccggtgccgcgcatcgctgtcaccttctct
ctgcaggagctggaggagatccagagggactgcggcgtgtacaggggccgaatggagagg
atcgcccgctacagtgccatcaacagggaggagaaggctctgcgcacagagctagccagg
caggagctcatcgttcaggttcgggagacgactgccaaggcgctggagaccattcgaggg
cgccaggtgtctcagcggcttgcccaggaaaccaagaaacgggagcgattccaggagctg
aagcagcagctggtggtggagcaggagcgacgctctgcagctcagcagcaggaggcggac
agcgatttcgggttcgcccgtgagatccgggaccgagagaggaggctacaggcattggaa
gagcagctggagagccaggccaggagagagctgattgaacactacagccggctgtcggag
gaggccgctgcgcgggagcggcgagcactgtggaaggttcagagactccggctggggact
gagcgcaacagcttcctgcagctgcaacagagacacatccaggccatgctggagaagttc
cctctgggagagcacagagagcagctggatatcattcccaagggagattcacctaggaga
ctcccggcaggtggaaagggagactctggggagcagggagcccaggagatcctgaagcac
caatcctctgatcccagtattctcagagagcatcctcctgcgctggaggctgagccccag
gaatcggagaatcgaaccccagacagtgtacaggaggctccaggggacccccatccttac
cccactgggcccctcgaactgggggaacaggcgccccaagccagactcgagtccccgtgt
ccactggacattcacgactttctgcccaaacaaactcctgatctccctgccggcacctgt
ccgctggtgtccgcagtggacgcagctctgctggacatcggctctgagctgcctgaaggg
gcttccggtctgcagcaggagtacgacttcagtgccccctacagcccccttcagggagtc
agactcaggctgcgctggaacactcaccaacacacatctcaagccaacatccagctgggg
cagtacgcgtctgacatggagccgtctaaaccgagggcaagcattcacgggcatgtatca
gaggccaacatcaaggtcgggcaaaatatatccgaggtgcaggtggctaaaccagtggta
aatgttcatggacattcgtctgagtccaacatccagctggggcagtacgcgtctaacatg
gagacgtctaaaccgagggcaagcgttcacgggcatgtatcagatgccaccatccagcta
ggggatgagtcgaaacccacagtcctcaatgaaagacaaactcttcaagcaatcacagag
tttagtgagggtgaccctgatccagggatctcagagccagtcctagagctgcatgatcaa
gcacctgctgtccagctaggggagcatatgcctgttacagagctgcctggactgatggcc
agtgttcctggacaggcatctgaagaaaatctaaagataatgcagaaggcttctgagagg
gaactcagcctgccacatgtgcacatccaaggccatgcatcagaggcacatattaagctt
ggagggtacatgtcagacacagagctgtccaaacccagggttaacattcatggacatgcg
tctgaaggcagcatcaaggtaggagagtatgtttcggacgctgatcaagttcaacctcat
ttgagtatccacaggcacgcgtcagactccagcatcaaagtgggaggttacgtgtcggac
agcgagcaggcaagccctcactggagtgtgcacgggcacgcatcagattccagcatcaaa
gtgggaggttacgtgtcggacagcgagcaggcaagccctcactggagtgtgcacgggcac
gcatcagattccagcatcaaagtgggaggttacgtgtcggacagcgagcaggcaagccct
cactggagtgtgcacgggcacgcatcagattccagcatcaaagtgggaggttacgtgtcg
gacagcgagcaggcaagccctcactggagtgtgcacgggcacgcatcagattccagcatc
aaagtgggaggttacgtgtcggacagtgagcaggcaagccctcactggagtgtgcacggg
cacgcatcagattccagcatcaaagtgggaggttacgtgtcggacagcgagcaggcaagc
cctcactggagtgtgcacgggcacgcatcagattccagcatcaaagtgggaggttacgtg
tcggacagcgagcaggcaagccctcactggagtgtgcacgggcacgcatcagattccagc
atcaaagtaggggagtacacagctgacgaggagccctccagacccaggtggagctcacat
gggcacgcatcccagtcccacttcagactgggaaagctgctgtcaaatgtggagcctttt
aaaccttgcagcagtgatgccctgtccagtattccagaagagaacacagagcttggaaca
agaccaggtgctgagaatgagacctcagaatgggcgcggagaggagagcagggtgccctg
acacagagtgaagaggctgctgtgctccagagaggcctgacagcagagcagctggaggcc
agtgtggagagcctgctttgccagggccctccctggggagtgggggaaggtttggggccc
gagtggccaagggagcgggcatacctgcactccctggcagcacagtaccaggtggagcag
taccaggacagctacaacctaatgactgcagcgcccgactcccacctcctacaccaggtg
acggccggcccctacgcgttccccgtggacccgtctctgcgcagagccacagacaccacg
gccgtgcagctgagtgagatggtgtccctgcccgtgctgatgaagcactctgtcactgcg
ccactcctcacacacgtgtccctggtgaacaaggccatcgtggattattacttcatggag
ctcaacatggagaggcactgtgaggcgctgcgccacttcctgctgatggaggatggagag
ttcgcccagtctctcagcgacctgctctttgagaagctgggctcgggacagacccccgga
gagctgctgaacccgctggtgctgaactccatcctgaacaagtccctgcagtacagcctg
cacggggactcgcagctcgcagccaatctgaccttcgcactgcgcttcctgccagagagc
ttccacccacatgcccctgacgcactcgcctgcctggagctgagatacaaggtggactgg
cccctgaatatcgtgatcactgacagctgcatgaacaagtacaaccgcatcttctccttc
ctgctgcagctcaagcacatggtctggaccctccgcgacgtctggttccacctcaagagg
gcagccatggtgaagggagcgggcagctctgtgcagttcagacagctacagctctatcgc
catgagatgcagcactttgtgaaggtgatccagggctacatcgccaaccagatcctgcat
gtcacctggagcgagttcagaaccaagctgggcagcgcagccaacctggacgacatccac
cacactcacgcggactacctcaacagggccatcttcagaggtctcctgacggagaaggca
gccccagtgatgaacatcatccacagcattttcagtctgatcctcaagttccgcgctcag
ctcatctcccagccctggagtagccagcagggggcagtggagcaccccagcttcggagtt
atgcagcagtcctaccgcaccttcaaatactactcacacttcctcttcaaagtggtgacc
aagctggtgaacagaggctaccagccacacttggaggacttccttctacgaatcaacttc
aacagctactaccaggactcctaa
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