Polyodon spathula (Mississippi paddlefish): 121320184
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Entry
121320184 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 7-like isoform X1
KO
K20632
deleted in liver cancer protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320184
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121320184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
RhoGAP
SAM_2
Tra1_central
Motif
Other DBs
NCBI-GeneID:
121320184
NCBI-ProteinID:
XP_041114373
LinkDB
All DBs
Position
1:complement(58052244..58220810)
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AA seq
1535 aa
AA seq
DB search
MIHKLNCEEEWAVVHYCNPYSMEYTRASVTGNDMPVASKKRSWEEHVTHRNGLQYSFDDL
DIICCHGISSDDLKSIMEKNDLSKSGRRERCASLPECCRESLVVGFPFKQLGGNTKEVDE
NANHEGNEHFLSLEASTETIVQVPDDNSDLSSEETNHVETEQHELAGTGPLGVIEPEIKS
NIETKDLAEVSANYSKLHPNFVSNEGNKETVESGVKEDLEPCVAHFDQVNEESVQLKPNG
LNVERTEEYSELLQKASSTQHTETSEVVKENLTTNDVIDPSAIMLTGCDGQHISDMSPVN
CLFRSDTESIACFDGVSTVNAKGDEQDSETDSSHITNSTESLKTNDSQDSPNPCEPVECR
VQLRKGKEMREDRDRSRLDSMVLLIMKLEQLDQDIENALSTTSSTTNTPTQKRRHLPELD
SQIENGATTLSANQNSKSSPQLIYSTLTFTTPAAGTGAKPKTGTMSGISKKEKAEIEAKE
ACDWLRAAGFPQYAQLYEDSLFPIEIASVTRDHDFLDRDAIEALCRRLNTLNKCAVMKLE
ISPQRKRSEDSDEDEPCAISGKWTFQRDSKRWSRLEELDVFALTDNPGSFPLEEPLLKVG
VSSESVLTDLSEQPEVGSIHSVGSSTGSQGAGLQSAGMGATRTSSVTSICSSGNSVDNED
SFSEDIPSPKENSGFQYDTKPGGKSTRSKAKSFLKRMESLRLKSSPTKKKKVTSKLVISG
PVLQEGIDEEKLRSFNCVEIPRLNGHHSSLPRNRSVSYSTQMSSSSSSQSETGSSTVSTP
SPVTRARSHSTAYNNNKRGGMYLEGFDPFNQKQLQHDEQLLPASCDVAEQNLRNQAAVKE
DVIFFIPEGHKPGTFPKALCNSSPHSRLRRESSDDSSKGSICGGQNHRNSATSLDNRLSI
YDNVPCSLLLDGEEEEAPYPKLDDILHHVRGLQRFVNEWSEQACEEGDSDSALDSVSPCP
SSPLQNHLEEVEIGSDLDSTGNSLNEQEVLSSRQRRDSGVGASLTRSSRPQKLRWHSFQS
SHRPSLSSLLLQINCQSVMQMNLLQKYSLLKLTALLEKYTPTNKHGFSWAVPKFMKRIKA
PDYKDRNVFGVPLQVNVQRTGQPLPQCIQQAMRYLRSQCLDQVGLFRKSGVKSRIQALRQ
MNESCTDSISYEGQSAFDVADMVKQYFRDLPEPLLTSKLSETFLQIYQYVPKDQRLQAIK
AAFVLLPDENREVLQTLLYFLSDVTAAVKENQMTNNNLAVCLAPSLFHLNTLKRETSSPR
VMQRKHSLGKPDQKDLSENLAATHGLAHMIAECKKLFQIPEEMSSCRNSYMEQGLQPPKL
EELVGNNKEQSTGYKAYLQECIDGLLKEAKEKFKGWDSCSTSEQAELSYKKVCDGSPLRL
WKATVEVPAAPEDVLNRVLREQYRWNDDLLDSKVIESLDNQTEIYQYILTSMAPHPARDH
VMLRTWTTDLPKRACALVATSVDHDAAPLMGVRVNVLTCRYLIEPCGSAKSKLSYISRID
YRGRVPEWYNKMFGQLCAAEVVRIRDSFNNRSLEK
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgattcataagctaaattgtgaagaagaatgggctgttgttcattactgtaacccatac
tctatggaatataccagggcatctgtaactggaaatgacatgcctgtggctagcaagaag
agaagctgggaggaacatgtgacccacaggaatggattacagtacagttttgatgatctg
gatataatctgttgtcatggaatttcatctgatgatttaaagtcaattatggaaaagaat
gatttatcaaaatcaggacggagagaaagatgtgcctccttaccagaatgttgtcgtgag
tcacttgttgtagggtttccattcaagcaactaggtggaaacacaaaggaggtagatgaa
aatgctaaccatgaaggtaatgagcactttctgtctttagaagccagtacagagactata
gtccaggttccagatgacaattcagatctcagctcagaggaaactaatcatgtagaaact
gaacaacatgagttagcagggactggtcccttgggtgtcatagaaccagagataaaatca
aacattgaaaccaaggatctggcagaagtttctgcaaattatagcaaacttcaccccaac
tttgtttctaatgaaggaaacaaagagacagtggagtcaggtgtgaaggaagacttggag
ccttgtgttgcacactttgaccaagtgaatgaggaatcagtccaattgaagcccaatggt
ttgaatgtagaaaggactgaagaatattcagagttgcttcagaaagcctctagtacacag
cacactgaaacatctgaagttgtcaaagaaaacctcaccacaaatgatgtaattgatcct
tctgctattatgcttactggttgtgatggacaacacatatcagatatgagccctgtaaac
tgtctcttcaggagtgatacagaatcaattgcatgttttgatggagtttcaacggttaat
gccaaaggggatgaacaggattctgaaactgattcaagccacattactaattcaactgaa
agtctaaaaactaatgattcccaggatagtccaaatccttgcgagcctgtggaatgtaga
gtacaactgcgcaaaggaaaggaaatgcgagaagatcgagatcggtcgcgactggactcc
atggttctactgatcatgaaacttgagcagcttgatcaggatattgaaaatgcgcttagc
accacttcttcaacaacaaatacaccaacacagaaacgaagacatttacctgagttagac
tcacaaatagaaaatggagcaacaactctatctgccaatcaaaactcaaaaagctctcct
cagcttatttactcaacactgacatttacaactcccgcggctggcaccggtgccaaacca
aaaactgggaccatgtctgggatatcaaaaaaggagaaggctgaaattgaggccaaggag
gcgtgcgattggctacgggcagcagggttcccacagtatgcgcagctctatgaagattcc
ctgtttcccattgaaatcgcatctgtaaccagggaccatgattttctggatcgagatgcc
attgaggctttatgcaggcggttgaacacccttaacaaatgtgctgtgatgaagctagaa
atcagtccacaaaggaaaaggagtgaagactctgatgaagatgagccttgtgccatcagt
ggcaaatggacctttcagagggacagcaagaggtggtccaggctggaggagctggatgtg
tttgctttgactgacaaccctggctccttccccctggaggagccactactgaaagtaggg
gtgagcagtgaaagtgtccttactgacctgagcgagcagccagaggtgggctctatccac
agtgtcggcagcagcacggggagccagggagctggactgcagagcgcaggcatgggcgcc
actagaaccagctctgtgaccagcatctgctcatcgggaaactctgtggacaatgaagat
tcgttctctgaagacattccttcccccaaggagaattcaggctttcagtacgacaccaag
ccaggaggcaagagcactaggtcgaaggccaagagctttcttaagaggatggagagtcta
cgactgaagagctcgcccaccaagaagaaaaaggtgacctctaagttggttattagcgga
cctgtgttgcaggaagggattgatgaggaaaagctcaggagcttcaattgcgtggagatc
cccaggctcaacggacaccacagcagccttccgcgcaacaggagcgtttcctactccaca
cagatgagcagcagcagcagcagccaatcggagactggcagcagcacagtgagcactccc
agtcctgtgaccagagcccgcagccacagcactgcttataacaacaataaacgaggtggc
atgtacctggagggatttgaccccttcaatcagaaacagctgcaacacgatgagcagttg
ctgcctgccagctgtgacgtggctgaacagaacctccgcaaccaggcggcagttaaggaa
gatgtaattttctttatcccagagggccacaagccaggcaccttccccaaagcactttgc
aacagcagtcctcatagtagactgagacgggagagcagtgatgacagctccaaaggctct
atctgtggaggccagaatcaccggaactctgccacctccctggataaccggctcagcata
tacgacaacgtgccctgctcgctgctcctggatggggaagaggaggaggccccctacccc
aagctggatgacattctgcatcatgtaaggggccttcagaggtttgtgaatgagtggtcg
gagcaggcctgcgaggagggggattcggactctgcccttgactccgtctcaccctgccca
tcgtctccactacaaaaccacctggaggaggtggagattggcagcgacttggacagcaca
ggcaactccctcaacgaacaagaggttctgtccagccgccagcgcagggattctggtgta
ggcgcttctcttacaagatcaagcagacctcagaagttgagatggcacagtttccagagc
tcgcacaggccaagtctgtcctcattgctgctacaaattaactgccagtctgtaatgcag
atgaatctccttcagaaatactcccttttgaagctcacagccctgttggagaaatatacg
cccacaaataaacatggtttcagctgggctgtaccaaagtttatgaagcgaataaaggcc
cccgattacaaggacaggaatgtttttggagtccctcttcaagtaaatgtgcagcggaca
ggccaaccactcccccagtgcatccagcaagcaatgcgctatctccgcagccagtgcttg
gaccaggttgggctcttcagaaaatctggagtcaagtctaggattcaggcattgagacag
atgaatgaaagctgtactgacagtattagctatgagggacagtctgcatttgatgtagct
gatatggtaaaacagtatttccgggatttgccagagccactgttgaccagcaagctttca
gaaacgttccttcaaatatatcagtatgtgcccaaggatcagcgcctccaagccatcaag
gcagccttcgtgctcctgccggatgagaacagagaggtgttgcagactctgctgtatttt
ctaagtgacgtgactgccgctgtgaaagagaatcaaatgacaaacaacaacctagcggtg
tgcctggcaccctccctgttccacctcaataccctcaagagagagacctcttctccaagg
gtaatgcaaagaaaacacagccttggcaaaccagaccaaaaggacctgagtgaaaacctt
gctgccacccatggcctggcccacatgattgcggagtgcaaaaaactgtttcagattcct
gaggaaatgagcagctgcagaaactcatacatggagcaaggtctgcagcccccgaagctt
gaagagttggtgggtaataacaaagagcagtctaccggatacaaggcctacctgcaggag
tgtattgatgggcttctaaaggaagctaaggaaaagtttaaaggctgggacagctgttca
acttcagagcaggcagaactgtcctataaaaaggtatgtgacggctctcctctccgcctg
tggaaagccactgttgaagtgccagctgctccagaagatgtgttgaatcgagtgcttaga
gaacagtatcggtggaatgacgaccttttggattcaaaagtaattgagagtttggataac
cagactgaaatctatcagtacatcctcaccagcatggctccgcatcccgcccgggatcat
gtgatgctaaggacctggacaacagatttgccaaagagagcatgtgcactagttgctacc
tctgtggaccatgatgctgctccactgatgggggtccgagtcaatgtgctaacatgcaga
tacctaatagagccctgcggctcagcaaaatccaaactgtcctacatatcccggatagac
tacaggggccgtgttccagagtggtacaataagatgtttggacagttgtgtgcagcagaa
gtagttagaatacgagactcttttaacaatcgttcacttgaaaaataa
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integrated database retrieval system
