Polyodon spathula (Mississippi paddlefish): 121320202
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Entry
121320202 CDS
T07273
Name
(RefSeq) iroquois-class homeodomain protein irx-1-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121320202
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121320202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Myc_N
Motif
Other DBs
NCBI-GeneID:
121320202
NCBI-ProteinID:
XP_041114388
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Position
8:complement(13062181..13065586)
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AA seq
370 aa
AA seq
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MPSLYEGRLQLRQRLGIWSLQCSKIPASQIGFGNFFIGKNINMPHGYQTMVWGCPPGVPP
VPGHPAVALSYSGMQGYSFIPYLHLGHNMRQMGPYQLKSASPYHQALLGQGAPFYSPYRA
MAAEHPGRAGKAVARESTGALKTWLSEHLKNPYPTKGEKVMLAIVTKMSLTQVSTWFANA
RRRLKKENKVSWVCKSKTDEESESEEEEAVEKRERAEEEEEEEEIDLQTVDENENEGSGS
EGSDQEPIRTPNRLSPGPPGDGLKESERDAALGNNRESENKGVTRFGDSTKPELEAKENT
QPQKPQIWSLVETATSGTGHSAVKKRPVHINSQDTGGLCANLAVRNGQYFPLYLPAHYTH
RLGLSCGMRK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgctatatgaagggcggctccagctcaggcagcgtctaggaatttggagtctc
cagtgttccaagattcctgcgtcacagattggatttggaaatttctttattgggaaaaac
atcaacatgccgcatggatatcagactatggtttgggggtgcccacctggagtcccccct
gttcctggtcaccctgcagtagccctgtcctattctgggatgcagggctacagtttcatc
ccctatctgcatctgggacacaatatgagacaaatgggtccctatcagctgaagtcagcg
tctccctaccaccaggctctcctcggccaaggtgcacccttctactcgccctaccgagcc
atggcagctgagcacccgggtagggcgggcaaagcggtcgcccgagagagcaccggagcg
ctcaagacctggctcagcgagcacctgaagaacccatacccgaccaagggcgaaaaggtc
atgctggccattgtcaccaagatgagcctcacgcaggtctccacctggttcgccaacgcc
aggaggcgactgaagaaggaaaacaaagtgagctgggtgtgcaagagcaaaaccgacgag
gagagtgagagcgaggaagaggaggctgtagagaaaagagagcgtgcggaggaggaggag
gaggaggaagaaatcgatttacagacagtggatgagaatgagaatgaaggatctgggtct
gagggttccgaccaggagcccatcaggacgccaaacagactcagtccagggccaccaggg
gacgggctaaaggaatcggaaagagatgcagctctggggaacaaccgcgagagtgaaaat
aagggggtcacacgctttggtgattctacaaaacccgaactagaagcgaaagagaataca
cagccacagaaaccccaaatatggtccctggtcgaaacagcaacctcgggcactgggcac
agtgcagtgaagaaaagacccgttcatatcaacagccaggacactggcggcttgtgtgcg
aatttggctgtcaggaatggacagtattttcctctgtatttgccagcacattacacccat
agactcggtttgtcttgtggtatgcgaaagtaa
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