Polyodon spathula (Mississippi paddlefish): 121320236
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Entry
121320236 CDS
T07273
Name
(RefSeq) vacuolar protein sorting-associated protein 37A-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121320236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320236
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121320236
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
121320236
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121320236
Exosomal proteins of colorectal cancer cells
121320236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
UEV
UQ_con
BAR_4
Motif
Other DBs
NCBI-GeneID:
121320236
NCBI-ProteinID:
XP_041114426
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All DBs
Position
1:59340998..59351210
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AA seq
395 aa
AA seq
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MNWIFPLSKGSGPLPPLTSLQQQRQRQIESLKTAHSNLAEIQKDVEYRIPFTVNNTTISI
NILLPPQFPQEKPAVSVYPRVRHRLVDSHNGTVVTSPLITNFTMHSDLGKIIQSIMDDFW
KNPPVLASGSSGFPFMYNKPSGIPPYPPQGFHFIPAFPQQEAPRSVAPASMQVPGTDSMP
ASPLGFSVTRPAAPTYGFITDLPLPVPTADSQAGLNGHTYKMPEIPETFPELSELSISQL
KDMSDQEDVLLEHFVCLPQLKQVTSDKDEMVKNIVEMAKNNLQLEPQLEGKRQDVLYKYE
QITQMKSAFETKMQRQHELSESCSLSALQARLKVAAHQAEEESEDIAEDFLEGKVEIDDF
LTNFMEKRTLCHCRRAKEEKLQQTINTHGQFNAPL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaactggatttttccactgtccaagggttctggacctcttccacctcttacaagttta
cagcaacaaagacagaggcagattgaatccctgaagacagcccactccaacctagctgaa
atccaaaaggatgtggaatacagaataccttttaccgttaacaacacaacaatcagtatt
aatatccttcttcctccgcagtttccacaggagaagccagcagtcagcgtgtacccacgt
gtaagacatcgcttagtggacagccacaatggcacagtggtcaccagtccactcataacc
aatttcaccatgcattcagatctgggtaaaatcatacagagcatcatggatgacttctgg
aagaatccccctgttttggcatctggatcttcagggtttccctttatgtacaataagcca
tcaggaattcctccataccctcctcagggttttcacttcatccctgctttcccccaacaa
gaagctccccggtctgtggccccagcatctatgcaggtcccaggaacagactctatgcct
gcatctcctcttggcttcagcgtcaccaggcctgctgctcctacctacggcttcattaca
gacttgcctttgccagttcccactgcagactcgcaggcaggtcttaatggacatacttac
aagatgcctgaaattcctgaaactttcccagaactgtcagaactaagtatatcgcagcta
aaagatatgagtgaccaagaagatgtgctgcttgagcattttgtatgtcttccacaactg
aaacaggtcacctctgacaaggatgaaatggtcaagaacatcgtagagatggcaaaaaat
aatttgcaacttgagccacagttagaaggaaaaaggcaagacgtattatacaaatatgag
cagataacccagatgaaatctgcctttgagacaaagatgcaaagacaacatgaactaagt
gagagttgcagtttgagtgccctgcaggccaggctcaaagtagcagctcaccaagcggag
gaggagtcagaggacattgcagaggacttcctggagggcaaagtagaaatagatgacttt
ctcaccaacttcatggaaaaaagaacactttgccactgcagaagagccaaagaagaaaaa
cttcagcagacaataaatacccatggccagtttaatgcaccattataa
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