Polyodon spathula (Mississippi paddlefish): 121320265
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Entry
121320265 CDS
T07273
Name
(RefSeq) iroquois-class homeodomain protein IRX-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121320265
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121320265
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Myc_N
MscS_TM
Nucleo_P87
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
121320265
NCBI-ProteinID:
XP_041114452
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All DBs
Position
8:13059091..13060495
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AA seq
323 aa
AA seq
DB search
MPHGYQTLVLGCPPGVPPVPGHPAVALCYSGMQGYSFIPYLHLGHNMRQMGPYQLKSASP
YHQALLGQGAPFYSPYRAVAAEHPGRAGKAVARESTGALKTWLSEHLKNPYPTKGEKVML
AIVTKMSLTQVSTWFANARRRLKKENKVSWVCKSKTDEESESEEEEAGEKRERAEEEEEI
DLQTVDENEGSGSEGSDQEPTRTPDRPSPGPPGDGLKESERDAALGNNRESENKGVTRFG
DSTKPELEAKENTQPQKPQIWSLVETATSCTGHSAVKKRPVHINSQDTGGLWADLAVRNG
QYFPLYFPAHYTHRQTLPGGMNC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatggatatcagactctggttttggggtgcccacctggagtcccccctgttcct
ggtcaccctgcagtagccctgtgttattctgggatgcagggctacagtttcatcccctat
ctgcatctgggacacaacatgagacaaatgggtccctatcagctgaagtcagcgtctccc
taccaccaggctctcctcggccaaggtgcacccttctactcgccctaccgagccgtggca
gctgagcacccgggtagggcgggcaaagcggtcgcccgagagagcaccggagcgctcaag
acctggctcagcgagcacctgaagaacccatacccgaccaagggcgagaaggtcatgctg
gccattgtcaccaagatgagcctcacgcaggtctccacctggttcgccaacgccaggagg
cgactgaagaaggaaaacaaagtgagctgggtgtgcaagagcaaaaccgacgaggagagt
gagagcgaggaagaggaggctggtgagaaaagagagcgtgcggaggaggaggaagaaatc
gatttacagactgtggatgagaatgaaggatctgggtctgagggttccgaccaggagccc
accaggacgccagacagacccagtccagggccaccaggggacgggctaaaggaatcggaa
agagatgcagctctggggaacaaccgcgagagtgaaaataagggggtcacacgctttggt
gattctacaaaacccgaactagaagcgaaagagaatacacagccacagaaaccccaaata
tggtccctggtggaaacagcaacctcgtgcactgggcacagtgcagtgaagaaaagaccc
gtccatatcaacagccaggacactggcggcttgtgggcggatttggctgtcaggaacgga
cagtattttcctctgtattttccagcacattacacccatagacaaacccttcccggtggt
atgaactgttag
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