Polyodon spathula (Mississippi paddlefish): 121320341
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Entry
121320341 CDS
T07273
Name
(RefSeq) glutamate receptor 4 isoform X1
KO
K05200
glutamate receptor 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121320341
04082 Neuroactive ligand signaling
121320341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121320341
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Glutamate (ionotropic)
121320341
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Ortholog
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
121320341
NCBI-ProteinID:
XP_041114497
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All DBs
Position
9:complement(3453245..3544446)
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AA seq
907 aa
AA seq
DB search
MRIICKQIVLLFSSFWGLAMGAFPSSVQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEA
PFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLITP
SFPTEGESQFVLQLRPSLRGALLSLLDHHEWNRFVFLYDTDRGYAILQAIMEKAGQNGWQ
VSAICVENFNDASYRRLLEDLDRRQEKKFVIDCEAERLQNILEQIVSVGKHVKGYHYIMA
NLGFKDISLERFMHGGANVTGFQLVDFNTPMVIKLMQRWNKLDQREYPGSESPPKYTSAL
TYDGVLVMAEAFRNLRRQKIDISRRGNAGDCLANPAAPWAQGIDMERTLKQVRIQGLTGN
VQFDHYGRRVNYTMDVFELKNTGPRRIGYWNDVDKLVLIQNEMPFPNDTSGIENRTVVVT
TIMEGPYVMLKKNHELFEGNDRYEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK
IWNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFL
DPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPPSDQPPNEFGIFNSL
WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE
DLSKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPTVFGKTTAEGVARVRKSK
GKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRATYRNAVNLAVLKL
NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE
FCYKSRAEAKRMKLTFTEAMRNKARLSITGSVGENGRVLTPDCPKAVHTGTSLRQSSGLA
VVSLDLP
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaggattatttgcaagcagattgtcttgctattttctagcttttggggactggcaatg
ggagcgttccctagcagtgtgcaaattggaggtctcttcatcagaaacacagatcaggaa
tacactgcatttcgcttagcaatttttttacacaacaccagccccaacgcgactgaagcg
ccttttaatttggttcctcatgtggacaacattgaaacagctaacagctttgctgtaaca
aatgccttttgttctcaatactccagaggagtttttgcaatatttggactgtatgacaag
cgatcagtgcacaccctgacctcattctgcagtgcgctgcacatctcgttgatcacgccc
agtttccccactgagggcgagagccagttcgtgcttcagctgcggccgtccctcagaggc
gctcttctcagcctccttgaccaccacgaatggaaccgcttcgtctttctctatgacacc
gaccgggggtatgccatacttcaagcaattatggaaaaagcaggacaaaatggctggcaa
gtcagtgccatatgtgtggagaattttaatgacgccagctacaggaggcttttagaagat
ttggatcgaaggcaagagaaaaaatttgtgatagactgtgaagccgagagacttcagaac
attctagaacagatcgttagtgttgggaagcatgtcaaaggctaccattacatcatggcg
aacttgggttttaaggatatctcactcgagaggttcatgcatggtggagccaacgtaaca
ggattccagctagtggattttaacactcccatggtaattaagctcatgcagcgctggaac
aagctggaccagagggagtatccaggatcagagagcccaccaaagtacacatcggcatta
acatacgatggggtgcttgtaatggctgaagcgtttcgcaatctccgaagacagaaaatt
gatatttccaggagagggaatgcaggggattgcctagctaaccccgctgctccatgggct
caggggatagacatggagagaacactcaagcaggttcgaatccaaggattaactggaaat
gtgcagtttgaccactatgggcggagggtaaactacacaatggatgtgtttgaactgaaa
aatacaggaccgagaaggatcggttactggaacgacgtagacaagttggttttgatccag
aatgaaatgcctttccccaacgacacctccggcattgagaaccgaactgtggttgtaaca
accataatggaaggtccttatgtcatgctgaagaaaaaccatgagctctttgaagggaat
gaccgctatgaaggctactgtgtggacctggcctcagagattgcaaagcacatcggcata
aagtataagattgccattgtacctgatgggaaatatggagccagagaccccgagactaag
atttggaatgggatggttggagaacttgtatatggaaaagcagagatagcaatagctcca
ttaaccatcaccttggtacgagaagaagtcattgacttttccaaaccttttatgagcttg
gggatttcaatcatgatcaagaagccacagaagtccaagcctggtgtcttttccttcctc
gaccccttggcctatgaaatctggatgtgtatagtgtttgcctacattggggtcagcgtg
gtgctttttctggtcagccggtttagcccctatgagtggcacacagaagaacctgaagat
ggtaaagaagggccaccaagcgaccagcctcccaatgagtttggtatctttaacagcctc
tggttttccctgggtgcctttatgcagcaaggatgcgatatatcaccaaggtctctctcg
ggtcgcattgtcggaggtgtttggtggttcttcacgctgattattatttcatcctacacg
gctaacctcgctgccttcctcactgtggagaggatggtttcaccaatcgaaagtgcagag
gacctctccaagcaaaccgagatcgcttatggaacactagactcagggtcaaccaaagag
tttttcaggagatcaaaaattgcagtgtatgaaaagatgtggacctacatgaaatctgca
gagcccacggtttttggcaaaaccactgcagagggagttgcccgtgttcggaaatcgaaa
ggaaagtttgcttttctcttggagtccaccatgaatgagtacattgagcagaggaagcct
tgcgatacaatgaaagtgggaggaaacctggattccaaaggctacggagtggccacaccc
aagggttctccattaagagcaacgtacagaaatgctgttaacctcgcagttttaaaactg
aatgaacaaggcctcttggacaaattgaaaaacaaatggtggtacgacaaaggagagtgt
ggcagcgggggaggggactccaaggacaagacaagtgccctgagtctcagcaatgtggct
ggtgtcttctacattcttgtcggaggcctgggcttggcaatgctggtggctctgatagag
ttctgttacaagtccagggcagaggccaagagaatgaagctaacgttcactgaagccatg
agaaacaaagccagactatccatcacagggagtgttggagaaaatgggcgagttctgacc
cctgattgcccaaaggctgtacacaccggaacatcccttcgacaaagttcaggactggct
gtggtatcgttggacttgccatga
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