Polyodon spathula (Mississippi paddlefish): 121320362
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Entry
121320362 CDS
T07273
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121320362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320362
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121320362
Endosome - Golgi transport
Arf GTPase associated proteins
121320362
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121320362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
PH
SAM_1
PH_11
PH_3
PH_6
SAM_2
SOS1_NGEF_PH
PH_8
PH_13
Motif
Other DBs
NCBI-GeneID:
121320362
NCBI-ProteinID:
XP_041114532
LinkDB
All DBs
Position
9:5987555..6022537
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AA seq
732 aa
AA seq
DB search
MSSEESSLPVSEWLTVLRLSQYISSFERFGYALVSDCRGVTNEELHRAGVVLPGHQKRIL
TSLDKIFSEEPQNQKPVPKKRNIFCSLSPRNDSQDALPMDGDTMEAGSPKTNDSLIHDKV
PPPIPPRVTPNRPPIKFTPAVATGHLQCPDTLPLEATTSEQQLLKKCTPSPVSEEFHLYE
QCSPDQTSKVVPPLPAKRYIMGAKETQAPPPLPKRPPVAPPRSVLSSDFPSLSSLSLVND
PEEGEKAPVVPPRTKLSHQPFSQPDLPHRKSPKLSKIKSSSTDSSEGYECPDQIDDNPFD
AVEMSEKEDFLTVEKGKRLNSLYSDDEHLDEDSDSYEAISNNGKSWQDSDLSMLQQRHSA
HSLVSLSIGVKGDLRAVPQLSPVIKHGWLCKNPPQGSYIYQKRWVKLDAEYLRYFDSDKD
MYSKRIIPTASITSVANVGDQKFEVVTNNRTFVFRAESDSDRNEWVKVLQETVRDQSVAN
RVSMAQQSSTCIEEKQGALELRGLRSKLYVVVSGDKVFLYKNIEDYQLGIGITSIEMNLG
NVKDADRRAFDLTTPYRTFSFVADSDKQKEEWLEAMQNSIGEALSNYEVAEKIWKEESNC
FCADCGAAQPEWAAINLCVVFCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELVELFQVL
GNRRSNAFWAANVPPSEALSPASTSEERRRFISAKYREGKYRRYHPLFGNQEALDKVRML
PNKTQNLMIELV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgaggagtcctctctcccagtctctgaatggctcacagtgctgcgtctgagc
cagtacatcagctcctttgagaggtttggctatgcgctcgtctcggactgccggggggtt
accaacgaggagcttcaccgtgcaggagtggtcctcccaggtcaccaaaagcgaatcctg
actagccttgacaaaatcttttcagaagaaccacaaaaccagaagccagtccccaaaaag
aggaacatattctgcagcctatcgcccagaaatgactcccaggatgctttgccgatggat
ggtgacacgatggaggctggtagccccaaaactaatgactctctcatccatgacaaggtc
ccccctcccattccacccagggtgacacccaatcggccacctatcaaattcactcctgct
gtagccactgggcatctccaatgccccgatacactgcccttggaggccacaacttcagaa
cagcaactcctgaagaaatgcacgccctccccagtttctgaggagtttcatctttatgag
cagtgttccccggaccagacgagcaaagttgtgccaccgctgccagcaaaacgttatatc
atgggtgcaaaagagactcaggccccaccaccactgccaaagcgtccaccagtggcgcca
ccaagatctgtgctgtccagtgatttcccttctctaagcagtctgtctctggttaatgat
ccagaggaaggtgagaaggccccggtggttcctccaagaaccaaactgtctcatcagcca
ttcagccaacctgacctaccccacagaaaatcacctaaactctcaaagatcaaatcttct
tcaacggacagctcagagggctatgaatgtccggatcagattgacgacaatccgtttgac
gccgtagagatgtcggaaaaggaagatttcctgactgtagaaaaggggaagcgattgaac
agcctctacagcgatgacgagcatctggatgaagatagcgatagctacgaagccatatca
aataatggaaagtcctggcaggactctgatctgagtatgctccagcagagacactctgct
cactcgctggtcagcctgagtataggagtgaaaggagatctcagggcagtgcctcagctc
tcgcctgttattaaacatggctggctgtgcaagaatcctccacagggctcttatatctac
cagaaacgatgggtgaagcttgatgcagagtacttgagatattttgacagtgataaggac
atgtattcaaaacgaatcatcccaacggcttctattactagcgttgctaatgtgggagac
cagaagtttgaggtggtcacgaacaataggacgtttgtcttcagagctgagagtgactct
gatcgtaatgagtgggtaaaggttctgcaagagaccgtccgagaccagagtgtggcaaac
cgggtgtccatggcacagcagtccagcacatgcatcgaggagaagcaaggtgccctggaa
ctgaggggcctgcgctccaaactctacgtggtggtgtcaggggataaagtctttctctat
aagaatatcgaggattaccagctagggatcggcattacctccatagagatgaacctggga
aatgtgaaggatgcagatcgtagggccttcgacctcaccaccccctacaggacgttcagt
tttgtggcagattcagataagcagaaggaggagtggctggaggccatgcagaactccatc
ggggaggctctgtccaactatgaggtggctgagaagatctggaaagaggagtcaaattgc
ttctgtgcagactgtggggccgcgcaacccgaatgggctgccatcaacctctgtgtggtg
ttctgtaagcgctgtgcaggtgagcacagaggtcttgggccaagcatctcaaaagtacgg
agtctgaagatggaccgaaaagtttggactgaggagcttgttgagttgtttcaggtgctg
ggtaaccggcggagcaatgcattctgggcagcgaacgtgcctccgagtgaggcgctgtca
ccagcaagcaccagcgaagagaggcggagatttatcagtgccaaataccgagaggggaag
tatcggcgttatcatccactgtttgggaaccaggaggcgctcgacaaggtacgcatgctc
cccaataaaacacaaaatctgatgatagaattggtgtaa
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