Polyodon spathula (Mississippi paddlefish): 121320398
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Entry
121320398 CDS
T07273
Name
(RefSeq) nectin-3-like isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
pspa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121320398
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121320398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121320398
04090 CD molecules [BR:
pspa04090
]
121320398
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Nectin family
121320398
CD molecules [BR:
pspa04090
]
Proteins
121320398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
Ig_2
C2-set_2
I-set
Izumo-Ig
He_PIG
Syndecan
Motif
Other DBs
NCBI-GeneID:
121320398
NCBI-ProteinID:
XP_041114615
LinkDB
All DBs
Position
9:complement(9000825..9128221)
Genome browser
AA seq
532 aa
AA seq
DB search
MAGGMLFHCHRNNLFLTGLKATILIFMYNLSGVSTERVIVDPHITAILGKKIELMCVVHV
QEALTQISWEKVHNGSTQTLAVFNPTYGISIPDEYQDKLSFKTPSENDATLVLKEVSFTD
AGEYTCKVVTFPYGNTQASTTVTVMVEPKVSVSRGSDPLMDGGNETVVAVCTAENGKPAA
EITWVSEVFGEPVQTLIDEPNDCVTVENRYNWKPTRFAQGKQLTCVIRHPALESEIRIPF
TLDVLHAPEVAITGYDDNWFVGRENVQLKCNAAANPGATQYSWSRLNGELPAGLRIANNT
LIFGRPLDHNDSGTYQCEVTNDIGSRTNTRNIYILDPPPTTTTLPTTPLPHTTAGITSLA
ATKRALFTSPTLESLHEGPLGTIIGGAVGGALFLILLIILVGVCYMKKRRTFRGDYYTKQ
YTGPSDMQKESPLDVLQPHELHQYNDPNNGSLKQKTNEVIYPDYSKDVKNNEWGNVENMN
RCTEGDTLPVDYYEDRMPVGTKYAQDDYYEGNDGDFVSHLDGSVISRREWYV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggaatgttattccattgccacaggaataatctgtttttaaccggattgaaa
gcgacaattttgattttcatgtataatctttctggggtcagcacagaacgagttatagtt
gatccacatattacagcaattttgggaaaaaagatcgagctgatgtgtgtggttcacgtt
caagaggcactgacgcagatttcctgggagaaagttcacaatggaagtacacaaacactt
gctgtttttaatccgacatatggaatttctattcctgatgaatatcaggataaactttcg
ttcaaaaccccatctgagaatgatgcaaccctagtactgaaagaagtgagctttactgat
gctggagagtacacgtgcaaggtggtaacattcccttatggcaacacacaagcatcgacc
actgttactgtaatggttgagcccaaggtaagtgtgtcacgtggctctgatccattgatg
gatgggggaaatgagacggtagttgctgtgtgcacagctgaaaatggaaaacctgctgca
gagatcacctgggtgtctgaggtttttggagaacctgttcaaaccttgattgacgagcct
aatgactgtgtaactgttgaaaatcggtacaattggaaaccaaccaggtttgcccaagga
aagcaacttacttgcgtgattcgtcacccggcattagaatcggagatacggattccattt
accctggatgtcttgcatgcaccagaagttgcaataactggttatgatgataactggttc
gttggcagggagaatgtacaacttaaatgtaatgctgctgccaatcctggggctacacaa
tattcgtggagcaggttgaatggagagctgccggcaggtttgcgaatagcaaacaacacc
ttaatatttggtagacccttggatcataatgactcagggacgtaccaatgtgaagttaca
aatgatattggaagtaggacaaatacaaggaatatctacatactagatcctcctcctact
actaccaccttacctacaacaccactgcctcacacgactgctggcatcacaagtttagca
gcgacaaaaagagcactgttcacatcaccaacactggagtcattgcacgagggaccttta
ggcactataattggcggtgctgttggcggtgccctatttctaatactgctgatcatcctt
gttggagtttgctacatgaaaaaacgaaggacattccgtggagactattacaccaagcag
tacacaggaccatctgacatgcagaaagaatctccgttagatgttctgcaacctcatgag
cttcatcaatacaacgaccccaacaatggcagccttaagcaaaagacaaatgaggtgatc
tacccagattactccaaagatgtgaaaaataacgaatggggcaatgtggaaaatatgaac
agatgcacagaaggagatacgctgccagtcgattattatgaagatagaatgccagttgga
accaaatatgctcaagatgactattacgaaggaaatgatggtgactttgtgtctcactta
gatggttcagtaatttctcgaagagaatggtatgtgtag
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