Polyodon spathula (Mississippi paddlefish): 121320430
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Entry
121320430 CDS
T07273
Name
(RefSeq) trafficking protein particle complex subunit 10-like isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320430
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121320430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_2
SNAP
TPR_14
TPR_12
TPR_7
Motif
Other DBs
NCBI-GeneID:
121320430
NCBI-ProteinID:
XP_041114692
LinkDB
All DBs
Position
9:complement(15978229..16108865)
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AA seq
1068 aa
AA seq
DB search
MSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFEDALVQYDELDA
LFTQYVVNFGAGDGANWLTSFCQPVHSWNGLLLRKPIDMEKRDLIQKSKATLLDMRSYLF
SRQCTLLLFLQRPWEVTQRALELLHNCVQELHLLEVLVLQGALDCWVFLSCLEVLQRIES
CSDWAQLDSNASHTVGLWTYATEKLKSLGYLCGLASENGPNSEDLNRTVDLLAGLGAERP
ETANSLQSPYKKLKEALSSVEAFEKHYLELSHAAMDMYRTIGRLRSARLVGKSLAEFYMR
KGDPQKAEGFLQEALKTYLAEGWALPVTHTRKQLAECQKQLGQTENYLQTSSMLASDINL
PEEERKHFCQEILNFANQQTDNQVQKVVLGMSSFAQLRQLHFKPCSAVVHVGGSLTIELR
LHSHMPIPVWLEQVAASVHFSIEKNSFHKAVESLSKQRVMAGGNNGIIHIQTDPPAGRSP
QVSLPSLELYEMHDKSPSDNSLNSTGVICKNVHLLLRHQESVSSIETPSGVSLEDSAQVL
KTTDVLLEPGFNKIVFTAPAHKPGTYTLRQLCATVGSVQFVLPHIYPIVQYEVYSQEPQL
KVEPLTDSLLAGIAQKVKFTIITGHYAIKKGDVLQLSNVDAMPILYSPGSTATILSSTGE
KVEESVLMIQSSEKVTSIMLPLTPAYHVIEFELEVICHILSKPFDNERLTNGELHWKTKE
NQKPDSCQAYITQKMSIDCPWSIYSTIIALTFCNPFKAAQSLLSAGKRKYIQVCLQNMSE
VSFHLLDHNLTESLKCPNIELVSMNVKTRQHVYRKQTVFCLWEIKWTKELPSSLQYRFSV
NFCPAISEEESTSFKPYTYEFQLENIVTLYNVKAEIYPVLGAEHCRTGSLCSLEVSITRL
SDLTEADQDESLTESDGLCTTKLMYEVVDNSSNWALCGKSSGVISMPVAARASHKVHMEV
MPLFAGNLPFPNVKVSKYLPHYSSHSTQPDIDSWLENDLSVDKALDEQADSSSIRSRTST
HSASNEHKGLSMPRLQSFSPGQVFNCSTGMQVLVVPSKDDHVLEVNVT
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttactaagaacctgggcaaatttgaagatgacatgcgaacactgcgggaaaaa
cggactgagccaggctggagcttctgtgaatacttcatggtccaggaagagctagcgttt
gtgtttgagatgctgcaacaatttgaagatgccctggtgcagtatgatgaattggatgct
ctgtttacacaatacgtcgttaattttggtgctggagatggagccaactggctgacttct
ttctgccagccggtgcacagctggaatggtctattgcttcgcaagcctatcgatatggag
aagagggacctgatccagaaaagcaaggccaccttgctggacatgcgcagctacttgttc
tcgcggcagtgcaccctgctcctcttcctgcagcgcccctgggaggtcacccagcgtgcc
ctggagctgctccacaactgtgtccaggaactccatctattagaggttttggtgctgcag
ggagcgctggattgttgggtcttcttgagctgcctggaagtgctgcagagaatagaaagc
tgttctgattgggcacaattagattcaaatgcatcacatacagtcggtctttggacttat
gctactgaaaagttaaagtccttgggttatctgtgtgggctggcatcagaaaacggaccc
aattctgaagacttaaacagaacagtggatctcctggctggactgggagcagaacgacca
gaaactgccaacagtctgcaaagcccttataaaaaactcaaagaagccttatcttcagta
gaagcctttgaaaaacactacttagaactctcccatgctgctatggatatgtacagaaca
attggtcgacttcgatcagctcgacttgtaggaaaaagcctggctgagttttacatgaga
aaaggggatcctcagaaagcggaaggcttccttcaagaggccctcaaaacctatctggct
gagggctgggctctgcctgtcacccacaccaggaagcagttagctgagtgtcagaagcag
cttgggcagacagaaaattatcttcagacaagtagcatgttagccagtgatatcaatctc
ccagaagaggagaggaaacacttctgtcaggagatcctgaattttgctaaccagcaaact
gataaccaagtacaaaaggtggttttggggatgagctcatttgcacaactaaggcagctg
cacttcaaaccttgctcagccgtggtccatgtaggtggctccttgaccattgagctgagg
ctccacagccacatgccaatccctgtgtggctggagcaagtggcagccagcgtgcacttc
agcattgagaaaaacagcttccacaaggcagtagagtccctgagcaaacagcgggtaatg
gcaggtgggaacaacggcattattcacattcaaaccgaccctcctgctgggcgttctcca
caagtcagtctgccctcactggagctgtacgagatgcatgacaagagcccctctgacaac
tcgctcaactccaccggcgtcatctgcaagaatgtgcacctgctgctgcgccaccaggag
agtgtttcctccatagagacgccatctggagtttcactggaagacagcgcacaggtcctc
aaaacaactgatgtattgctagagccaggttttaacaagattgtatttactgcgccggcc
cataagccagggacatacacccttcgtcagctgtgtgcaacagtgggaagcgtgcagttt
gttctcccccatatctaccccattgtgcagtatgaggtctattctcaggagccccaactc
aaagttgagccactgacagacagtcttttggcagggattgcccaaaaagtgaagtttaca
ataattactgggcactatgcaataaagaaaggggatgtactacagctaagcaatgttgat
gccatgcctatcctgtattctcctgggagtactgcaacaatattgtccagcactggagaa
aaagttgaggaaagtgtattgatgatccagtcatccgagaaggttaccagcattatgttg
ccacttactcctgcttatcatgtcattgagtttgaactggaagtaatttgccacatcctc
tcaaaaccatttgacaatgagaggctgaccaatggggagctccactggaaaaccaaagag
aatcagaagccagactcctgccaagcctatatcactcaaaagatgtctattgactgccca
tggtctatttattctacaattattgccttgacgttctgcaacccctttaaagctgcgcag
tccttgctatctgctggaaagaggaaatacatacaggtgtgcctgcagaatatgtcagaa
gtgagttttcatttgttagaccacaacctgacagaaagcttgaagtgcccaaacattgag
ctggtgtctatgaatgttaaaactcgccagcatgtctacagaaagcagacagtattctgc
ctgtgggaaattaagtggaccaaagaacttccttccagtttgcagtatcggttttctgtc
aacttctgtcctgcaatcagtgaagaggaatccacctcttttaaaccctacacctatgaa
tttcagctggaaaacattgttacgctgtataatgttaaagcagagatctacccagtgctg
ggagcagaacactgcagaactggttccctctgctctctagaagtttccatcacacggctt
tctgacctcacagaagcagatcaggatgaatctctgacagaatctgatgggctgtgcaca
accaagctcatgtacgaagtggtggacaacagcagtaactgggcattgtgtggaaagagc
tcgggggtcatctcaatgcctgtggcagctcgggcctcacacaaggtccacatggaggtg
atgccactgttcgctggaaacctgcctttccccaatgtgaaggtctccaagtaccttcct
cactactcatcccactctacacaaccggacattgacagctggcttgagaatgacctttca
gttgacaaggcactggacgaacaggcagacagcagtagcatacgaagccgaaccagcacg
cactccgccagcaatgaacacaaagggttgtccatgccccgtctgcaatcattcagccct
ggccaggtcttcaactgcagcactggcatgcaagtccttgttgttcccagcaaggacgac
catgtcctggaagttaatgttacatga
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integrated database retrieval system
