Polyodon spathula (Mississippi paddlefish): 121320441
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Entry
121320441 CDS
T07273
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121320441
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121320441
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121320441
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121320441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
TAN
Motif
Other DBs
NCBI-GeneID:
121320441
NCBI-ProteinID:
XP_041114706
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All DBs
Position
9:complement(16848800..16907300)
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AA seq
739 aa
AA seq
DB search
MNVVLASVPSYRGKMAPMLQSPEIQFAQKLASNEKPIRTRAIKKLRKYLSIRSQKPEGGF
SNDELLKIWKGLFYCMWMQDKPLLQEELATVISRLIHSLQKTDAQYLFLETFLQTMNREW
NGIDRLRLDKFYKLIRMVLRQFFELLKRESWDESLVERFGCILSTQVLSAASGAPSGIQF
HILDIYMEELATVGAEELTAEENFKLIDPFCKIAAKTKDRLLLQAIAHSIFDEIVDQSPF
AIEDLMKEVQQQGQNVSDDSENQDLSKSKKSTGRQLNGKEAEKEQNFEDDSEGTVEMPED
DEDIGPVLQFDYKAIADRLFELASRTSTPSQNRKIIYRLVKKFQDLNDGIFPQDEYPEEV
STDEDDDELFGSRRRMKKRRNTESLLEKSSETAKGKDKKKKEGKKMEKTLNGGVEQKKEN
TEASPAGTSTELKQPCATEESTETKAKKKKTKLKESSPKRIVADPSSNKIDGHTGEKRKK
KKKAKEAVEDGHDQEDCLEQTAAAILSSRGKKIKKLRVLGVNGEIPCLEQTTPLEEGRSP
SELQKNTKKTVELVQEDPAAEQVESSQTKKMMKKKKRKIEAANPAEVNGLREYGGKKKKK
SCESKETVISVASKKPLQKTKASTEKTEFVRFENSSFPVPLFFKRANGGKPRAAKRGLQT
PESGSKKVTFGLNNNKTAEFKRTDKSILVSPEGTSRVAFDPQQKPLCGVLKSPLSVMCSR
HKTNTPASTKKRATAADFF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagtcctcgcgagtgttccaagctatagagggaagatggcgccgatgttgcaa
tctccggagatccagtttgcacagaaactagcttcaaacgaaaaacctatccggacccgc
gccataaagaaactgaggaaatacctcagcatcagatcacagaaaccagaaggtgggttt
agtaatgatgaactgctcaagatatggaagggccttttctactgcatgtggatgcaagac
aagcctcttttgcaagaagaattggcaactgttatttctcggctgatacattccttgcag
aagactgatgcccagtatttatttctagagaccttccttcagaccatgaatcgggaatgg
aatggcatagacagactgcgtcttgataaattttacaagcttatccgaatggttttaagg
cagttttttgaactgctaaagagggaaagctgggatgagagcctagttgagcggtttggg
tgtatactgagtacccaagtgctgagtgctgccagtggtgctccgtcaggaattcagttc
catatcctggacatttacatggaggagttggctactgttggagcagaagagctcacagca
gaagagaattttaagttaattgatccattttgtaagatcgctgctaagacaaaagatcgc
ctgctcttgcaggcaatagcacatagtatatttgatgagattgtggaccagtctccattt
gccattgaagacttgatgaaagaggtgcagcaacagggacaaaatgtgtctgatgactca
gaaaatcaagatctctccaaatcaaaaaaatcaacaggacggcaactaaatggtaaagaa
gctgaaaaagagcagaattttgaagatgactctgaaggtaccgttgaaatgcctgaagat
gatgaggatattggacctgttcttcagtttgactacaaggcaattgcggaccgtctcttt
gagcttgctagccgaaccagcacaccttcccagaacagaaagatcatctacagactggta
aaaaaattccaagacttaaatgatggcatctttccccaggatgagtaccctgaggaggtg
tccacagatgaggatgatgatgagttatttggaagtagaagaagaatgaaaaagagaagg
aatacagaaagtctgctggagaaaagcagtgagacagccaaagggaaagataaaaaaaag
aaagagggaaagaagatggagaagacactgaatggcggagtagagcagaagaaagagaac
acagaggcttccccagcagggacttctactgaactgaagcaaccctgtgcaacagaagag
tcaacagaaaccaaggcgaagaagaaaaagacgaaattaaaggagtccagtcccaaaaga
attgtggctgaccccagcagcaacaagatagatgggcatacaggagagaaaaggaaaaag
aagaagaaagcaaaggaagctgtggaagacggacatgatcaggaggattgcttggagcaa
acagcagctgccattctctcttccagaggcaaaaaaattaaaaagttgcgagtcctggga
gtgaacggagaaataccatgtcttgagcaaaccactccactggaagaaggccgttccccc
tcagaattacaaaagaataccaagaagacagttgagctggttcaggaggacccagcagca
gagcaggtggaaagcagccagacaaaaaagatgatgaaaaagaaaaaaagaaagattgag
gcagctaaccctgcagaggtcaatgggctcagggaatatggtggcaagaaaaagaaaaag
agctgtgaatcaaaagagactgtcatctctgtggcttccaagaagccactccaaaaaacc
aaggcaagcacagagaagacagagtttgtgagatttgaaaattcctccttcccagtgcca
ttatttttcaagcgtgctaatggtggcaagcccagagcagccaaacgggggctgcagact
ccagaatcgggttcaaagaaagtcacctttggactgaacaacaacaagactgcagagttc
aaaaggactgacaaaagcatattagtgagtccagagggaacatcgcgagtggcctttgac
ccccagcagaagcccctttgcggagtgctcaagtctcccttgagcgtgatgtgttccagg
cataaaaccaacacccctgcctcgaccaagaaaagagcaaccgctgcagactttttttaa
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