Polyodon spathula (Mississippi paddlefish): 121320464
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Entry
121320464 CDS
T07273
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K24993
paraspeckle component 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121320464
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121320464
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Ig-CFAP74_2
DUF3256
Motif
Other DBs
NCBI-GeneID:
121320464
NCBI-ProteinID:
XP_041114734
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Position
9:complement(18679286..18785948)
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AA seq
515 aa
AA seq
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MANRNLKQVKIQNSSSPPGIKNLKRESDSPEKQEPKMSAASGGEPGAGEPVELGLTLDLK
NFKRPGEKTFTQRCRLYVGNLPTDLTEDDFRKLFAKYGEANEVFINRDRGFGFIRLETRT
LAEIAKAALDGTIVKNRPLRIRFATHGAALTVRNLSPVVSNELLEQAFSQFGPVERAIVV
VDDRGRPTGKGFVEFASKPAARKAMDRCAEGAYLLTTSPRPAIVEPMEQFDDEDGLPEKL
IQKTPQYHKEREQPPRFAQPGTFEFEYSSRWKALDDMEKQQRDQVDKNIREAKEKLEAEM
EAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIEMRHEEERRRREEEMMRQRE
QEEMRRQQDGFKSNFMDNREQEMRMGDMGPRGAINMGDTYSPVAAGNQGPPQMMGMNMNN
RGAMSATAMGPGPAMGPEGATNMGAPMMPDNGTMHNDRFPQTGPPQMGSPLVGRPGVEAP
QTPMASAGAVGGGPGGFGRGNQGGNFDGPNKRRRY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccgaaatctaaagcaggtcaaaatccagaacagctcatcgccaccaggaatt
aaaaacctgaagcgcgagtccgattcgccggagaagcaggagccgaagatgtctgcggcg
tctgggggagaaccaggcgccggcgaacccgtcgagttaggactaactctggacctaaaa
aacttcaagaggcctggcgagaagacatttactcagcgctgccgactctatgtcggtaac
ctaccaactgacttaactgaggacgatttcaggaaattgtttgcaaaatacggtgaagca
aacgaggtgtttatcaatcgtgaccgtggctttggcttcattcggctggaaacaaggact
ttggctgaaattgcaaaagcagcactagatggaactatagtaaaaaacagaccgctccgt
attcgattcgctacccatggtgctgctttgactgtccggaatctgtcacctgtcgtttcc
aatgagctgcttgaacaggccttttctcagtttggtcctgtggagagagcaattgtcgtg
gtagatgaccgtggcaggccaactgggaaagggtttgtagaatttgcatctaagcctgca
gctcgaaaagccatggatagatgtgcagaaggagcatacttactaacaacatcgccccgt
cctgctattgttgagccaatggagcagtttgacgatgaagatggacttccagaaaaatta
attcagaaaacaccacaatatcataaggaaagagagcagcccccacgttttgctcagcct
ggtacatttgagtttgaatattcatctcgatggaaggcccttgatgatatggaaaagcaa
cagcgtgatcaggttgacaaaaatatccgagaagcaaaagagaaacttgaagctgaaatg
gaagccgctcgtcatgaacatcagctcatgctaatgagacaagatcttatgaggcgtcag
gaagagctaaggcgtttggaagaactgcgaaaccaggaacttcagaagcgcaagcaaatt
gaaatgagacatgaggaagaacgaagacgacgtgaagaagaaatgatgcggcagagagag
caagaggaaatgagacggcaacaagatggcttcaagtccaattttatggataacagagaa
caggaaatgagaatgggtgatatgggtccccgaggagcaattaatatgggagatacgtat
agcccagtagctgctggtaaccaaggccctcctcaaatgatgggtatgaatatgaacaac
agaggagcaatgtctgccactgctatgggacctggtcctgccatggggccagaaggagca
acaaacatgggagcaccaatgatgccagataacggaacaatgcacaatgatagattcccg
caaactggtccaccacaaatgggctcccctttggttggcaggcctggtgttgaagctcca
caaacaccaatggctagtgcaggggctgtgggtggtggacctggtggttttgggagagga
aaccaaggggggaactttgatggacctaataaacgtcgtagatactga
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