Polyodon spathula (Mississippi paddlefish): 121320469
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Entry
121320469 CDS
T07273
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00061
Fatty acid biosynthesis
pspa00071
Fatty acid degradation
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
pspa03320
PPAR signaling pathway
pspa04146
Peroxisome
pspa04216
Ferroptosis
pspa04920
Adipocytokine signaling pathway
Module
pspa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121320469
00071 Fatty acid degradation
121320469
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121320469
09143 Cell growth and death
04216 Ferroptosis
121320469
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121320469
03320 PPAR signaling pathway
121320469
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121320469
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121320469
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121320469
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121320469
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121320469
Exosomal proteins of breast cancer cells
121320469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121320469
NCBI-ProteinID:
XP_041114749
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Position
1:61095988..61131282
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AA seq
697 aa
AA seq
DB search
MQAPELLRQLRLPEFGEVRQYVRTLPTNTLMGFGAFAALTTYWYATRPKALKPPCDLALQ
SVEIEGGDFARRSVLLDSDQSLAFYYSDAKTMYDIFQRGIRVSNNGPCLGSRKPNQPYEW
ICYREVADRAEFLGSGLLHRGHTPTSEQFIGIFAQNRPEWTIAELACYTYSMVSVPLYDT
LGPDAIAYILEKAEISTVICDTPEKAQLLLECTSKGAHQMKTIILMDAFDIDLVGQAKKL
GIEVISLRELESVGKLNRRNPVPPKPDDLALICFTSGTTGNPKGAMLTHANVVSNAAACI
KITENLHILSPEDVMMSFLPLAHMFERVVEFVILCHGARIGFFQGDIRLLMDDLKTLQPS
VFPVVPRLLNRMFDRIFGQANTPLKRWLLDFATKRKEAELKSGIVRNDSVWDKLIFNKVQ
ASLGGKVRLMITGAAPVSPTVLSFLRAALGCQFYEGYGQTECTAGCSMTLPGDWTAGHVG
PPMPCSAIKLVDVAEMNYFASKGEGEVCVKGANVFKGYLKDPEKTAEALDEDGWLHTGDI
GKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYIRSDVVAQVFVHGDSLQACLVAIV
VPDPEVLPRWAKKRGFEGSCTELCNNKEVKNAVLEDMVKLGKEAGLKSFEQIKDIVLHPE
MFSIQNGLLTPTLKAKRGDLRSYFREQIDGLYSNIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacctgaactgctaagacaactgcgactgcctgagtttggagaggtcaggcaa
tatgttcgaactcttcctacaaacacgctcatgggcttcggagcctttgctgctctcaca
acatactggtatgccaccagacccaaagctctgaaaccgccatgtgacctagcgctgcag
tcggtggaaatagagggaggtgattttgctcgaagatcagtgcttcttgatagtgaccag
tccttggctttctactacagtgatgccaagacaatgtatgacatttttcagagaggcatt
cgtgtttcaaacaatggcccctgtctgggatccagaaaaccaaaccagccatatgaatgg
atatgctaccgagaggtggcagacagagcagagtttctaggatctggattactgcacaga
ggacacacaccaacctctgagcagttcattggaatctttgcacaaaacagacctgagtgg
accattgctgaactcgcctgttacacctactccatggtgtcggtccctctgtatgacacc
ctagggcctgacgccattgcttacattcttgaaaaagcggaaatctccacagtaatctgt
gacactcctgagaaagcccagctgcttctggagtgcacttctaaaggagcgcaccagatg
aaaactatcatcctcatggatgcttttgatattgatctggtggggcaagcaaagaaactg
gggattgaagttatcagtctgagggaattagagtctgttggaaagttaaaccgaaggaat
ccagtgccaccaaagccggatgatctggcgcttatatgttttaccagtggaaccacagga
aaccccaaaggagcgatgcttactcatgcaaacgttgtatccaatgcagctgcttgtatc
aaaataacagagaatctgcacatccttagtcctgaagatgtaatgatgtcattcttgcct
ctcgcccacatgtttgaacgtgtagttgagtttgtcattttgtgtcatggtgcccggata
ggattttttcaaggtgacatcagacttctcatggatgacctaaaaacgttacagccttct
gtatttccggtagtgcctcgtctgctcaacagaatgtttgacaggatatttggacaagct
aacacccctttgaaaaggtggctgctggactttgcgactaagaggaaggaagcagagctg
aaaagtggaattgtgaggaacgacagcgtgtgggacaagctcatcttcaacaaagtacag
gctagcctgggtggtaaagtaaggctcatgatcaccggagcggctcctgtttctccaaca
gttctgagtttcctcagggctgccctgggatgccagttttatgaaggctatgggcagact
gaatgcacagctgggtgttcaatgacattacctggagactggacagcaggtcatgttgga
ccaccgatgccatgtagtgctatcaagctggttgacgtagcggaaatgaattactttgct
tctaaaggggagggggaggtttgtgtgaaaggggcaaatgtattcaaaggctacctgaag
gaccctgagaaaacggctgaagctcttgatgaagatggttggctgcacacaggagacatt
gggaaatggttaccgaatggcactctgaagatcattgacagaaagaagcatatcttcaag
ctggcccagggagaatatattgcaccagagaaaattgaaaacatttacattcggagtgat
gttgtcgctcaggtgtttgtccatggagacagtcttcaggcgtgcctcgtggcaatcgta
gtgccagatcctgaggttttgcctcgctgggctaagaagagggggtttgagggttcatgc
acagagctgtgcaataacaaggaagtgaagaatgctgtcttggaagacatggtaaaactg
ggaaaggaagccggtctgaaatcatttgagcagattaaagatatagtgcttcatccagag
atgttctccattcagaacggcctgctaactccaacactgaaggcaaaaagaggggatctg
agaagctacttccgggaacagattgatggtttgtactccaacatcaaaatgtaa
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