Polyodon spathula (Mississippi paddlefish): 121320479
Help
Entry
121320479 CDS
T07273
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320479
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121320479
Endosome - Golgi transport
Rab GTPases and associated proteins
121320479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
121320479
NCBI-ProteinID:
XP_041114767
LinkDB
All DBs
Position
9:19779350..19861420
Genome browser
AA seq
1131 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVTEKSSLYFVLQRRRGHGDGGGKITGLLVGALDAVLDSNARVA
PFRILLQVPGSQVYWAIASGATVEEINQHWDWLAQNLLHTLPVFDNKEDITSFVSGKIKG
LIAEESRSKLAEQEEDPEKFRDALVKFETRFSLPSSEKLVTYYSCCCWKGRVPRQGWLYL
SINHLSFYSFLLGKEVKLVIPWADVTKLERSSTSFITDTIRVTTRSKERDFSMFLSIDEA
FRIMEQLADITIRRLLDNEVFELDQSLQEPAHITKRVLEERAQNEYFRALFRLPRQERLQ
EVVNCSLWTPFSRCHTAGTVYTSDSYICFVSKEEGCCTLVIPLREVISIEKMENTSLLPN
PVIISIRSKKAFQFIEIKNRDSLVENMSKRLESVQQKQQTCRKKTRSKALISPLPYYSLY
YDDVCTDSEPIEPTGKQNRHSLNEEALMSTFHHTEPETSDSKVTREQVKERLWQDHFSEY
GRSSCMFRTEKIRKLVAMGIPESLRGELWLTFSDAITDLASHPDYYANLVEESMGKCCMA
TEEIERDLHRSLPEHPAFQNETGIAALRRVLTAYAYRNPKIGYCQSMNILASVLLLYAKE
EEAFWLLVAVCEKMLPDYFSRRVIGAQVDQSVFEELIKERLPELSEHLTDLSALSSISLS
WFLTLFLSIMPFESAISVVDCFFFEGIKAIFQLGLAVIDANAVDLCNSKDDGQAMMILTR
FLDHVKNQESPLPPITNQHACFEDDKESFQETEIADLIRDSYEKFGDITVEQIERLRCRH
RIQVLQTHEDTAKENTLRVVAPDILLTLEELGEVYDLFKREHFINCYWGENVPALQYHEP
SLQYVDQYRIDRAQFKNLYNLLSPWICGVHTNTVAHRAFRLLDENMDSLINFKEFAVCLD
TMYCEELNEKIRLLYRLHIPPALTENDEEEQSPLKTPLLSTTRPLCVAPSNGEASDYKEQ
LRQMLKDLAKDKEKNNEKELPTMNQREFIQFCKTLYSMFHEDPNENELCQAIATVTTLLL
QIGEVGQRIRSLGSTSEESSGNDDGGDAAACSRVPEEDSVFMDTRDTTRKNSQTSPLSEG
EWTVTFEQILASLLTEQSLVNFFEKPVDLKTKIESAKLNQYDQRITPLLIQ
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaagccagaggaagttctgctgaaaaacgctctgaagctctgggtgaccgag
aagtccagcttgtattttgttttgcagcgcagaaggggacatggagatggtgggggcaaa
ataacaggcctcttggttggtgctctagatgctgtgttggactccaatgcccgagttgcc
cctttccgaatcctgctgcaggtaccaggatcgcaggtgtactgggccatcgccagtggt
gccacggtggaggagataaaccaacactgggattggcttgcgcagaacctactccacact
ctgccagtcttcgacaataaagaggacatcaccagcttcgtcagtggcaagatcaagggg
ctaattgcagaggagtcaaggagcaagctggctgagcaggaagaggatccagagaagttc
cgagacgccttggtgaaattcgagacacgcttcagtctccccagctcagagaagctggtc
acctactactcctgctgctgctggaaggggcgggtcccccgacagggctggctctatctc
agcatcaaccacctctccttctactcatttctactgggcaaggaagtgaaactcgtaatc
ccctgggctgacgtcacaaagctagaaaggagctccaccagtttcatcacggacaccatc
cgcgtaacaacgcgaagcaaagagcgcgacttctccatgttcctcagcattgacgaggcc
ttccggatcatggaacagctggcagacatcacaatccgaaggctgctggacaacgaggtg
tttgaattagaccagtcgctgcaggagccagcacacataaccaaaagggtcctggaggag
agggcccaaaatgagtatttccgtgccctgttccggctgcctcggcaggagagactgcag
gaggtggtgaactgctccctctggacgcccttcagccgctgtcacactgcaggaacagtg
tatacctccgacagctacatctgcttcgtcagcaaagaagaggggtgctgcaccctcgtc
attccgctcagggaggtgatctcaatagaaaagatggagaacaccagcctcttgcccaac
ccagttatcatcagcatacggagcaagaaggcgtttcagttcatcgagatcaaaaacaga
gacagcctggtggagaatatgagcaagcgcttggaaagtgtgcagcagaaacaacagaca
tgccgaaaaaagacaaggagcaaggcgctgatctctcctctaccatattactcattatac
tatgacgacgtgtgtacagatagcgagcccatcgagccaactggaaaacagaacagacat
tcactgaatgaagaagctttaatgtctacttttcatcacactgaaccggaaacgtcagac
tccaaagttacaagggaacaggttaaagagcgtctgtggcaggatcatttttcagagtat
ggtcgaagcagctgcatgttccgaacggagaagatcagaaaactggttgccatggggatc
cctgagtctctgagaggggagctgtggctgactttttcagatgctatcactgatcttgcc
tcccatcctgactattatgctaatcttgtggaggaatccatgggcaagtgttgcatggca
accgaggagattgaacgtgacctgcaccgatctctgccagagcacccggcgttccagaat
gagactgggatagcagccttacgcagagtcttgacagcgtacgcttacaggaaccctaaa
attggatactgccagtccatgaatatcttagcctctgtgctgctgctatatgccaaagaa
gaggaagccttctggctgctggttgcagtgtgtgagaagatgctgccagattacttcagt
cggcgagttattggagcccaggtagatcagtctgtgtttgaggagctgattaaggaacgt
ctccctgagctatcagagcacttgacagacctgtctgccctctcctccatctctctgtcc
tggttcctcaccctcttcctcagcatcatgcccttcgagagcgccatcagtgtggtagac
tgcttcttctttgaaggcatcaaagccattttccagctgggcctggctgtgatagatgcc
aatgcagtggatctttgcaacagcaaggacgacgggcaagctatgatgatactgaccaga
tttctagatcacgtcaaaaaccaggaaagtcccttgccccccattaccaatcagcatgct
tgttttgaagacgacaaggaatcgttccaggagacagaaatagctgacctcatcagggac
tcttatgagaaatttggagacataacagtggagcagattgaacgtttgcgatgcagacac
agaatccaggtgctgcagactcacgaagacacggccaaggaaaacacactgagagttgtg
gcaccagacattttactgacactagaagaattaggagaagtgtatgacttgttcaagaga
gagcactttataaactgctattggggtgagaatgtgccggcgctgcagtaccacgagccc
agtctgcagtatgtggaccagtacaggatagaccgggcacagttcaagaacctgtacaac
ctgctgtcaccgtggatttgtggggtccacacgaatactgtggcacacagggctttccgt
ctgctggacgagaacatggactcactcatcaacttcaaagagtttgcagtttgcctggat
acaatgtactgtgaagagctgaatgaaaaaatcaggctgctatacaggctgcatatcccc
cctgctcttaccgaaaatgatgaagaggaacaatcacccctaaagacacccttgttgtct
actacaaggcctttgtgtgtagcaccctccaatggtgaggccagtgattacaaagagcag
ctgagacaaatgctgaaggatttagccaaagacaaagagaagaacaatgagaaagaactg
cccacgatgaaccagagggaattcatccagttctgtaaaacgctgtacagcatgttccat
gaggaccctaatgaaaatgaactgtgccaagctatcgccacggtgaccacgctgctgctt
cagattggggaagtagggcagagaatccgcagcctaggaagcacatccgaggagtcctct
ggaaacgacgacggcggagatgcagcagcttgctccagagtgccagaggaggactctgtg
ttcatggacaccagagacaccactaggaaaaactcccaaacatccccactctctgaagga
gaatggactgtgacgttcgagcagatcttggcttctctcctcacagagcagtcgctggtt
aacttcttcgagaaaccagtggacttgaagacaaaaatcgaaagtgcaaaactaaaccag
tatgatcagagaataaccccattgttgattcagtag
DBGET
integrated database retrieval system
