KEGG   Polyodon spathula (Mississippi paddlefish): 121320487
Entry
121320487         CDS       T07273                                 
Name
(RefSeq) DNA repair protein REV1-like isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121320487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121320487
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    121320487
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C REV1_C BRCT UBM BRCT_2 LIG3_BRCT POLH-Rev1_HhH IMS_HHH PTCB-BRCT DUF7674
Other DBs
NCBI-GeneID: 121320487
NCBI-ProteinID: XP_041114787
LinkDB
Position
9:20604337..20692011
AA seq 1242 aa
MNQGGWRKRADEDGGWGGWGGYIAAKVCKLEEQFKLDAQKQQQKEGTSSNIFSGVAIYVN
GYTEPTADELRRLMMLHGGQHHMYYSRSKTTHIIATNLPNSKIKELKGEKVVRPEWITDS
IKAGRLLSYVQYQLYAKQKGLNFNNVCKHKEPRPGPSNIHKEFESRVNGTAKSVPDPARN
SKVNGLHGWENLEEGDDFEFRDLEPVSPVRNHKAMDHHRDPPTMANGNAHKSNGALKPLE
ETLHSVKASVGNTQCLLSDRDSIDFRDCGAQRQQHANQNSDAHSNSAHAANLSSLHSNIK
LNGAHHLTVQGPLHAKSTSEPSSSKLSTAGLASPHAMARPGEPSFISDFYSHSRLHHISA
WKCEFTDFVNTLQRQSNGLFPGREKIKKLSAERTSLPSTATGNTGSPIPTGPQRRQTCIM
HVDMDCFFVSVGIRDRPDLQGKPVAVTSNRGGGKAALRPGANPELEMQYYKRRYMKNKTD
EVPDRLGGVTWESPGAAHMNGVDLDRTALSMAEIASCSYEARQAGVKNGMFFGQAKQLCP
NLQSVPYDFHSYKEVALTLYETLASYTHDIEAVSCDEALVDVTDIMTELGVSADCIASVL
RAEIKEKTKCCASIGMGSNILLARMASRKAKPDGQYYLKPEEVDDFIRDQLVTSLPGVGR
SIGYKLSAMGVKTCGNLQQVSMPKLQKEFGPKTGQILYRFSRGLDDRPVKTEKERKSVSA
EINYGIRFTQTTEAEAFLLNLSEEIQRRLVAAGVKGKRLTLKVMVRKAGAPVESAKYGGH
GICDNLVRTVNLEQPTDNSEVIGRETFKLFQMMKLNVLDVRGVGMQMQQLVPVLRTASFA
SSHAMAQSHSVRDLLLAQKSKRPGSQATAAPEVHVSAGCCDRSSTVRNAAVLSPQKTLST
LEPMPSTSRSEPVVRYNGGLHTPHSVKTRLNLNIEIPSPSQIDHSVLEALPAEIREQVEQ
MYLSRSEETPNGFVTGPESLGTLVLQVPEQLGQNSHSGIIVALPELSQVDPDVFSALPVE
LQEELKMAYNQRQGAPDAPNNQQITVGTRNTHLPLKQPLTVKTKKHNKKKNLVSPVKKTE
SPLKNKLLNSPAKSSGIRTGSPQKLIVDFLKYEESAAGKLKLETGPSTSGLIPVPQEEAS
KVPVHQGPNLAGAFELGDIKALLKEWVTSISDPMEEDILQVVRYCTDLIEDKDLEKLDLV
IKYMKRLMQQSVDSVWNMAFDFILDNIQVVIQQTYGSTLKIA
NT seq 3729 nt   +upstreamnt  +downstreamnt
atgaatcaaggtggatggaggaagcgggccgatgaagatggtggctgggggggctggggt
ggatatatcgctgccaaagtctgcaagctggaggagcagtttaaactggacgcacaaaaa
cagcagcagaaggagggcacatcttctaatatcttcagcggagtggccatttatgtcaac
ggctacactgaacccacagcagacgagctgcggaggctaatgatgcttcatggaggtcag
caccacatgtactactccagatctaaaaccacacatatcatcgccaccaatctgcccaac
agcaaaatcaaggagctcaagggagagaaggtagtacgaccagaatggatcacagacagt
ataaaggctggccgtcttctttcgtacgtccagtatcagctttacgccaagcagaaaggc
ctcaacttcaacaatgtatgcaaacacaaagagcctaggccggggccaagcaatattcac
aaggagtttgagagcagagtaaatggtacagcaaagagtgtgcctgatccagccagaaac
tcaaaagtaaatggcttgcatggctgggaaaaccttgaagagggagatgactttgaattc
agagatctagagcctgtctctcctgtacgcaaccacaaagcaatggatcaccatcgggac
cctccaaccatggccaacggcaatgcacacaagtcaaacggtgccttaaaaccactagaa
gagacgttacactcggtcaaggcttctgtgggtaatacccaatgccttctgtcggataga
gacagcattgacttcagagactgtggggcacagcggcagcagcacgctaaccaaaacagt
gatgcacattcaaactctgcccacgcagcaaacttgtcatctttgcacagtaatattaaa
ctcaatggtgctcaccatcttactgttcaggggcctttacatgccaaaagcacttcagag
ccgtcatcaagcaaactctccacagccggtcttgcctctcctcatgctatggccagacct
ggggagcccagctttatatccgacttctattcccactccagattgcatcacatatcagcg
tggaagtgtgagttcacagattttgtgaacacgctccagcggcagagcaatggccttttc
cctggcagggagaagataaaaaaactgagtgcagaaaggacctctttgccttccactgcc
acagggaacacaggttcacctatccccactggtccccagagacgccaaacctgtataatg
cacgtggacatggattgcttctttgtgtcagtgggcattcgagatagacctgatcttcaa
gggaagccagtggctgtcaccagcaacagagggggtggaaaagctgccctgcgcccaggg
gccaaccctgagttagaaatgcagtattacaagcggagatacatgaagaataaaacggat
gaggtccctgacagattgggaggtgttacatgggagagtcctggtgccgctcatatgaac
ggagtggatctggaccgaactgctttatccatggcggaaatagcatcttgtagttatgaa
gccaggcaggctggcgtcaagaacggaatgttttttggccaggcaaagcagctatgcccg
aacctccaatctgttccatatgattttcactcctacaaagaggtggcacttaccttgtat
gagactttagcaagctacacacatgacattgaagcggtgagctgcgatgaagccctggta
gatgtgactgacattatgactgagctaggagtgtctgcagactgcattgcaagtgtacta
cgtgccgaaatcaaagaaaaaactaaatgctgcgcctcaattggaatgggttcaaacatt
ctgctggccagaatggcaagccgcaaagccaaaccagatggacagtattatttaaagcca
gaggaagttgatgattttattagagatcagcttgtcactagtctgccaggagttggaagg
tcgattgggtataaactcagtgcaatgggtgtgaagacctgcgggaacctgcagcaggtt
tccatgcctaaactgcagaaggagtttgggccgaaaactggtcagatactataccgcttc
tctagagggctggatgacaggccggtgaagacagagaaggagaggaaatctgtgtctgct
gaaataaactatgggatacggtttacacagactacagaagccgaggcattcctgctgaac
ctctctgaagagatccagcggagactggtggcggcaggagtgaaggggaagcgactcact
ctcaaggttatggtgcggaaagccggcgcacctgtggaatcggccaaatatggaggccac
ggcatctgtgacaatctagtcaggactgttaacctagagcagcccacagacaacagcgag
gttatcgggagagaaaccttcaaattgttccagatgatgaaactaaatgtattggatgtg
aggggggttggcatgcagatgcagcagttggtcccagtcttgagaacagcttcctttgcc
tcatcccacgcaatggcccagtcgcactctgtcagggatctcctccttgctcagaaatca
aagaggccaggcagccaagccaccgcggctcctgaagtgcacgtgtcagcggggtgttgt
gacaggtcctccactgtgagaaatgctgctgtcttatcgcctcagaaaaccctgtcgaca
ctggagcccatgccaagtaccagcaggtccgagccagtggtccggtacaacggaggtcta
cacacgccgcacagtgtcaagaccaggctaaacctcaacatagagatcccatcgccttca
cagatagaccactcagtgttggaagccttgcctgcagaaatccgagagcaggtggagcag
atgtatttgagcaggtcggaggagacgccaaacggatttgtcacagggccagagtctctg
ggcaccctcgttctgcaggtcccagagcagctgggccagaacagtcacagtggcatcatt
gtagcactgccagaactctcccaggtagatcctgatgtgttttcagcgttacctgtggag
ctgcaggaggagctgaagatggcctacaaccaacggcagggagcacccgatgcccccaac
aatcagcagatcacagtcgggacaaggaacacacatctgccgctgaagcaaccacttact
gtgaagacaaagaaacacaacaaaaagaaaaacctggtgagtccggtaaagaagacagag
agccctctaaagaacaagctgctgaacagcccagcgaaaagcagtggaatcagaactggg
agccctcagaaactcattgttgacttcctgaaatatgaagaaagtgctgcagggaaacta
aagcttgagacggggccttccacatcaggtctcatacctgttccccaggaggaagcctca
aaagtgccagtccaccaagggcctaacctagctggagcgtttgagctcggagacatcaag
gccctactgaaggaatgggtcacctccatctcagatcccatggaggaggacattctgcag
gttgtgaggtactgcacagatcttatagaagacaaagacctggaaaaactagacctcgtc
attaaatacatgaagagactaatgcagcagtcagtggattcagtctggaacatggcattt
gacttcattcttgacaacattcaagtggtaatacagcaaacatatggtagcacattaaaa
attgcatag

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