Polyodon spathula (Mississippi paddlefish): 121320518
Help
Entry
121320518 CDS
T07273
Name
(RefSeq) GA-binding protein alpha chain-like
KO
K09441
GA-binding protein transcription factor, alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121320518
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
121320518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121320518
NCBI-ProteinID:
XP_041114844
LinkDB
All DBs
Position
9:22994510..23015010
Genome browser
AA seq
458 aa
AA seq
DB search
MSKGETEELIEIEIDGQEKQECMEEGIVEQTITTAEFVTQAIDINEPIGNLKKLLEPRLQ
CSLEGHEICLQDIQLDPDHSLFDQGVKTDGTVQLSVQVISRQGVEPKLNILEIVKPVETV
EVVIDPDAHSGVVEEDQLVEEGQVITLDGNKHIVGGIIADETSEQVTRWAAALEGYRKEQ
VRLGIPYDPVQWTADQVIHWAVWVMKEFSMVDVDVASIHIPGRELCGFTQEDFLQRVPHG
EILWSHLELLRKYVLASQDQSGQIATVTIDQPVQIIPASVQQTTPTAIKVLNNTGKQSKV
QRAPRISGGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDSRDCISWVGDDGEFKLNQPEL
VAHKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAGELN
HLVTECEQKKLARMQLHGLSQPVTTVTLATMQGDKDSS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagggagagacggaggagctgatcgagattgagatagatggacaggagaagcag
gagtgtatggaagaagggattgtggagcagacaatcacaacagctgaatttgtcacccag
gccatcgacattaatgagccaatcgggaacctcaaaaagctgctggagccccgtctccag
tgctcactggaaggccatgagatttgtctgcaagatattcagctggaccctgaccacagc
ctatttgaccaaggagtgaagactgatgggactgtccagctcagtgtgcaggtcatctcc
agacaaggcgtggagcccaagctgaatatcttggagattgtgaagccggtggagacagtg
gaggttgtgattgaccccgacgcacactctggggtggtggaggaggatcagctggtagag
gagggtcaggtcatcaccctggacggcaacaaacacatagtggggggcatcatcgccgat
gagacctctgagcaggtcacacgctgggccgctgcccttgagggttaccgcaaagaacag
gtccggctgggtatcccatatgacccagtgcagtggacagcagaccaggtgatccactgg
gcggtgtgggtgatgaaggagttcagcatggtggacgtggacgtagccagtatccacatc
cccggtagagagctctgcggattcacccaagaggacttcttgcagcgtgtgcctcacgga
gagatcctctggagccacctggagctgctgcgcaagtacgtgctggccagccaggatcaa
agtggacagatagccactgtcaccattgatcagcctgttcagatcatcccagcctcagtc
cagcaaaccacccccactgccatcaaagtgctgaataacaccggcaagcagagcaaggtg
cagcgagcccccaggatatctgggggagaggaccgcagctctccggggaacaggacaggt
aataatggtcagattcagttgtggcagtttctgctggagctcctgactgacaaggactct
cgagactgcatctcctgggtgggcgacgacggagagttcaaactgaaccagcctgagctg
gtggcacacaagtggggccagcgcaagaacaagcccaccatgaactacgagaagctcagc
cgcgccctcaggtattactacgatggggatatgatctgcaaggttcaaggaaagcgcttc
gtttacaagtttgtgtgtgacctaaagacgctgatcggctacagtgctggggagctcaac
cacctggtgacggaatgcgagcaaaagaagctggcgcgcatgcagcttcacggcctgagc
cagcctgtcaccaccgtcaccctcgccaccatgcagggggacaaggacagcagctga
DBGET
integrated database retrieval system
