Polyodon spathula (Mississippi paddlefish): 121320521
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Entry
121320521 CDS
T07273
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
KO
K04520
amyloid beta A4 protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121320521 (appa)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121320521 (appa)
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121320521 (appa)
Peptidases and inhibitors [BR:
pspa01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
121320521 (appa)
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Others
121320521 (appa)
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Others
121320521 (appa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
121320521
NCBI-ProteinID:
XP_041114852
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Position
9:complement(23019523..23088302)
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AA seq
744 aa
AA seq
DB search
MLQHLALLLLLVATLALALEVPTDGSVGLLAEPQVAMFCGKLNMHINVQTGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQSWCKKGRKQCRSHPHIVVPYRCLV
GEFVSDALLVPEKCKFLHQERMDMCESHLHWHTVAKESCGDRSMNLHDYGMLLPCGIDRF
RGVEFVCCPSDANQLDSTELEEDDSDVWWGGADADYTDGSEPREVELEDPEEADPALGED
DEEDDDEGEEEPEGDPNERTTSIAMTTTTTTTTESVEEVVREVCSEEAVTGPCRAMLPRW
YFDLASGQCVQFIYGGCGGNRNNFETQVYCLSVCGSVLPTTAASTPNAVDKYLETPGDEN
EHAHFQKAKESLEAKHRERMSQVMREWEEAERQAKNMPRVDKKAVIQHFQEKVESLEQEA
ASERQQLVETHMARVEAMLNDRRRIALENYLTALQADPPKPRHVFNLLKKYVRAEQKDRQ
HTLKHFEHVHMVDPKKAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGIAEEIQDQVDELV
KKEQDEVEEQLSALQSEPRVSYGNDALMPSLTESRTAPIDMLPSEEGGIGMDGLGYIHPV
GFMPVNTENEVEPVDARPAPDRGLTTRPGSGLTGVKMDEIPEVRMEAEVRLNSGYEVHHQ
KLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVVEVDAAVTPEE
RHLSKMQQNGYENPTYKFFEQMQN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaacatttggcgttgctgcttttattagtggctactttggctctggctttggag
gtgcccaccgatggatctgtgggtctgctagcagagccccaggtggccatgttctgtggg
aagctcaacatgcacatcaacgtgcagactggcaagtgggagtctgaccccagtgggacc
aagagctgcatcggcaccaaggaggggatcctgcagtactgccaggaggtgtatccagag
ctgcaaatcaccaacgtggtggaggctaaccagccggtgactatccagagctggtgcaag
aaggggcgaaagcagtgccgcagccaccctcacatcgtggtgccctaccgctgcctggtg
ggagagtttgtgagtgatgccctgctggttcctgagaagtgcaaattcctccatcaggag
cgtatggatatgtgtgagagccacctgcactggcacaccgtcgccaaggagtcctgtggt
gaccgctcgatgaatcttcatgactacggcatgctgctgccctgtgggattgaccgcttc
cgtggcgtggagtttgtgtgctgcccctccgacgccaaccaactggactccactgagctg
gaggaggacgattcggacgtctggtggggtggtgccgatgcagactacactgacggcagt
gagccccgggaggtggagctagaagaccctgaggaggcagacccagcactgggtgaagat
gacgaggaggatgatgatgagggagaagaagagcccgagggagaccccaacgagcgcacc
accagcatcgccatgacgaccaccaccaccaccaccaccgagtctgtagaggaggtagtc
agagaggtgtgctccgaagaggctgtgactgggccatgccgtgccatgctccctcgctgg
tacttcgacctggccagcggtcagtgtgtccagttcatctacggtggctgtggcggcaac
cgcaacaacttcgagacgcaggtgtactgtctctcggtgtgcggcagcgtgctgccaact
acagctgctagcacccccaatgcagtggacaagtatctggagactcctggtgatgagaac
gaacacgctcacttccagaaggccaaggagagcctggaggccaagcaccgggagaggatg
tctcaggtcatgagagaatgggaggaggcagagaggcaggccaagaacatgccacgggtt
gacaagaaggctgtcatccagcacttccaggagaaggtagagtctctggagcaggaggca
gcgagcgagcggcagcagctggttgagactcacatggcgcgtgtggaggccatgctgaac
gaccgcaggcgcatcgccctcgagaactacctcactgcactgcaggccgatcccccaaag
ccccgtcatgttttcaacctcctgaagaagtatgtgcgtgccgagcaaaaagaccgacag
cacacactcaagcactttgagcacgtccacatggtcgaccccaagaaggctgcccagatc
cgaccccaggttttgactcacctgcgggtgatcgaggagcgaatgaatcagagtctagga
ctgctctataaggtgcccggcattgcagaagagatccaggatcaagtggatgagctggta
aagaaggagcaggatgaggtggaggagcagctgtcagccctgcagagcgagcctcgggtc
agctacgggaatgatgccctcatgccctcattaacagagagccgtactgcccccatcgac
atgctgccctccgaggagggaggcatcggcatggacgggctgggatacatacaccccgtt
ggcttcatgcccgtcaacaccgagaacgaagtggagcctgtggatgctcgacctgctcct
gaccgaggactcaccacccggccaggctccggcctcactggcgtcaagatggatgagatc
cctgaagtgaggatggaggcagaggtccgactcaactctggatatgaggtgcaccaccag
aaactggttttcttcgcagaagatgtgggctcgaataaaggagctatcattgggctcatg
gtgggaggtgttgtcatagcaacggtcattgtcatcaccttggtgatgctgaggaagaaa
cagtacacctccatccatcacggtgtggtcgaggtggacgcagcagtgacccctgaggaa
cgccacctctccaagatgcagcagaacggttacgagaaccccacctacaagttctttgag
cagatgcagaactag
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