Polyodon spathula (Mississippi paddlefish): 121320523
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Entry
121320523 CDS
T07273
Symbol
adamts1
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 1
KO
K08617
a disintegrin and metalloproteinase with thrombospondin motifs 1 [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121320523 (adamts1)
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121320523 (adamts1)
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GFIT
Motif
Pfam:
ADAMTS_spacer1
Reprolysin
TSP1_ADAMTS
ADAMTS_CR_2
Reprolysin_5
TSP_1
Pep_M12B_propep
Reprolysin_3
ADAMTS_CR_3
TSP1_spondin
Adt-1
Reprolysin_2
TSP1_CCN
Reprolysin_4
DAGK_cat
Motif
Other DBs
NCBI-GeneID:
121320523
NCBI-ProteinID:
XP_041114856
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All DBs
Position
9:complement(23119256..23125500)
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AA seq
937 aa
AA seq
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MKSFFNISPVIMAIFWVSTVYGAWEEDIAVPVRVDGTANAQGTEGGRRTITPEEEEKEGQ
KRVYQLDAFGKRLTLELEPDQTFVAPGFTFQVVGISGTEKQSNPDSANLARCFYSGSVNG
DSGSLAALNLCNGLRGGFYLQGDEYFIQPHNSTGAHSTEGAEPHLIRRRSRGSQTGEGAS
KCGVNEQEQRVAETQPSQVQRGTVQEQAGRSRGKRFVSTPRYVETLLVADQSMAEFHGAG
LKQYLLTVMAVAAKLYKHHSIRNPISLAIVKIMVIYEEEKGPDVSSNAALTLRNFCKWQR
QHNPPHDRHPEHYDTAILFTRQDLCGAHTCDTLGMADVGTMCEPERSCSVIEDDGLQAAF
TTAHELGHVFNMAHDDAKHCASANGPNWSSHMMASTLSNLNRQQPWSACSAYMITSFLDN
GHGECLLDKPQKPVALPMVLPGTLYEADRQCQFTFGEESRHCPDLSSTCTTLWCTGTSAG
GLLVCQTKHFPWADGTSCGAGSWCVAGECVSKSDVPLYQTPVNGAWGAWGPWGDCSRTCG
GGVQYSFRECDNPVPKNGGKYCEGKRVQYHSCNTMDCPDGNGLSFREEQCQSHTDLSQAS
LGPSPVVEWVPKYTGVSPKDRCKLICRAKGTGYFFVLQSKVIDGTPCSPDSTSVCVQGQC
VKAGCDRVIGSKKKFDKCGVCGGDGSTCKKVSGSLDRTKPGYQDVVTIPAGATNLDVKQR
IQAGSKHDGSYLAIKTQGGSYVLNGEYTLSTLEQDISFKGSLLRYSGSSASLERIRSFGP
LAEPLTIQVLSVGNSYRPRIKYSYFTKRPIATKRKSFNAIQEAGGSEWEIREWGSCSRTC
GGGIQRRVVDCQDYRGRLTSECPAELRPADTRPCADTDCPHWLLGEWSACSRTCGRGFRK
RLLKCMGSDGKPVPQESCDLGQRPRPLLDLCHMTNCH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcattttttaatatatcacccgttatcatggctatattctgggtcagcacagtg
tacggcgcctgggaggaagatattgcggtaccagtccgggtagacgggactgccaatgcc
cagggaacagaagggggcaggcggactatcaccccggaggaagaggagaaagaggggcag
aaacgggtataccagctggatgcttttgggaaacggcttaccttagaactggagccagac
cagaccttcgtagcccctggcttcacgtttcaggtcgtgggaatctctggtacggagaag
cagagtaaccctgacagcgccaatttggctcgctgtttttactcgggctctgtaaacgga
gactccggctccttggcggcgctcaatctctgcaacgggctgagaggcggcttctacctc
caaggggacgaatatttcattcagcctcacaacagcaccggcgctcacagcacagagggg
gctgagccacacctcatccgccggaggagccggggctcccagaccggggaaggcgcttcc
aagtgtggagtgaatgaacaagagcagcgggtagcggagacccagccgtcacaggttcag
cgggggactgtccaggaacaagcaggccgcagcaggggtaagcggtttgtgtcaacgccc
cgctatgtggagacactgcttgtggctgaccagtccatggctgagttccacggtgctggg
ctgaagcagtacctgctgactgtcatggcggtggcagctaagctctacaagcaccatagc
atccgcaaccccatcagcctggctatagtcaagatcatggtcatatacgaggaggagaag
ggccccgatgtctcctccaacgctgccctcaccctccgcaacttctgcaagtggcaacgc
cagcacaaccctccacacgaccgccaccctgagcactacgacactgctatcctgtttacc
agacaggatctgtgtggcgctcacacctgtgacactcttggcatggcggacgttggcacg
atgtgtgaaccagagcgcagctgctccgttattgaggatgacggcctgcaggcagccttc
actacagcacatgagctgggccatgtgtttaacatggcccatgacgatgcaaagcactgt
gccagtgccaacggccccaactggagctctcacatgatggcgtctacactatccaacctg
aatcggcagcagccctggtctgcctgcagtgcctacatgatcacttccttcttggacaat
gggcatggagagtgcttgttggacaagcctcagaagccagtggccctgcccatggtccta
cccgggactctatatgaagctgaccgccagtgccagttcacttttggagaggagtctcgc
cactgtcctgacctcagcagcacctgcaccacactatggtgtacgggcacctccgcgggc
ggcctgcttgtctgccagaccaagcacttcccctgggctgatggaacgtcctgcggagct
gggagttggtgcgtggcaggagaatgcgtgagcaagagcgacgtgcccctctaccagact
ccagtgaacggtgcctggggagcgtggggaccctggggagactgctcgcgcacctgtggt
ggaggggtgcagtattccttcagagaatgtgacaacccagtccccaagaacggaggaaag
tattgcgaggggaagcgagttcagtaccactcctgcaacactatggactgccctgacggc
aacggcctttcgttccgtgaagagcaatgccagtcacacaccgacctctcccaggcctcc
ttagggcccagcccagttgtggagtgggtccccaaatacacaggggtctcccccaaagac
cgctgcaaacttatatgtcgcgccaaggggacaggctacttcttcgtactgcagtctaag
gttattgacggtaccccctgcagtcctgactccacgtcagtgtgcgttcaaggtcagtgt
gtcaaggctggctgtgacagagttatcggctccaagaagaagtttgacaagtgtggtgtg
tgtggaggagatggctctacctgcaaaaaagtctctggatctcttgaccgaacaaaacct
ggctatcaagatgtggtcacaatccctgcgggggccaccaaccttgatgtgaagcagaga
atccaggcaggctcgaaacatgatgggagctacctggccattaagacacagggtggctcg
tatgtgctgaatggggagtacaccctgtccacactggagcaggacatctccttcaagggc
tccctgctgcggtatagcggttcctctgcctccctggagcgcattcgcagctttggaccg
cttgctgaaccactcaccatccaggtgctatcggttggcaactcctaccggcctcgcatc
aagtattcgtactttaccaaaaggcccattgccaccaagagaaaaagcttcaatgccatc
caggaggcaggtggctctgagtgggagatccgcgagtggggcagctgctctcggacctgc
ggagggggtattcaaaggagagtggtagactgtcaggactacagaggacgactgacctca
gagtgccccgctgagctgcgaccagctgacaccaggccctgcgcagacacagactgcccg
cactggctgctgggagaatggtcagcctgctccaggacctgtggtcgcggcttcaggaag
cgtctgcttaagtgtatggggtccgatggcaagcctgttccacaggagagttgcgatctg
gggcagagaccgaggccactccttgacctctgtcacatgacgaactgtcactaa
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