Polyodon spathula (Mississippi paddlefish): 121320552
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Entry
121320552 CDS
T07273
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00020
Citrate cycle (TCA cycle)
pspa00640
Propanoate metabolism
pspa01100
Metabolic pathways
pspa01200
Carbon metabolism
Module
pspa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pspa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
121320552
00640 Propanoate metabolism
121320552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121320552
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
121320552
6.2.1.5 succinate---CoA ligase (ADP-forming)
121320552
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121320552
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-GeneID:
121320552
NCBI-ProteinID:
XP_041114910
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Position
9:complement(25388800..25429176)
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AA seq
463 aa
AA seq
DB search
MATSLICGRVSLGLRNSGSRRAISAAAKVLGGASGLFASHGFQQLQQQQQRTLSLHEYMS
IGLLKESGISVPKGMVASSSEEAYSVAKEIGSKDLVVKAQVLAGGRGKGTFEGGLKGGVK
IVFSPEEARDVSTKMIGKKLFTKQTGEKGRICNQVFICERRYPRREYYFAITMERSYQGP
VLIGSSQGGVNIEDVAAENPEAIIKEPIDIIEGIKVEQAVKVAQKMGFPPNLINEAAENM
IKLYNLFLKYDASMLEINPMVEDSSGSVMCMDAKLNFDSNAEYRQKKIFALRDWSQEDER
DRQAAKSDLNYIGLDGDIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATAQQVTDA
FKLITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVTDLELKIPIVVRLQGTRVDDAKALI
AASSLKILACDDLDEAAKMVVKLSEIVSLAKEAQVDVKFQLPI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcccttatctgtggaagggtttctttggggctgagaaactccggatccagg
agggcgatcagtgccgcagctaaggtgcttggtggagcttctggattatttgctagtcat
ggattccaacaactccagcagcaacagcagaggaccctctcactgcatgaatacatgagc
attgggctgctgaaagaatcaggcatctccgtacccaagggaatggtggcaagctcctct
gaagaagcctattcagttgccaaagagataggctccaaggatctggtagtgaaggcacaa
gtcttggctggtggcagaggaaaaggcacgtttgaaggaggcttgaaggggggagtcaag
attgttttctcccctgaagaagccagagatgtttccaccaaaatgattggcaagaaatta
tttacaaagcagaccggggagaagggcagaatatgcaaccaggtgtttatctgtgagcgc
aggtacccgaggcgggagtactacttcgcaatcacaatggaaaggtcctatcagggccca
gttttaataggaagctctcaggggggtgtcaatatagaagacgtagctgcagaaaatccc
gaggccatcatcaaggaaccaattgatattattgaaggcatcaaggtggaacaggctgtc
aaggtcgcacaaaaaatgggattcccgcctaacttgatcaacgaggctgcagaaaacatg
atcaagctgtacaatttattcctgaagtacgacgcttccatgttggagatcaaccccatg
gtggaagactcttctggaagcgtgatgtgcatggacgccaagttaaattttgattccaac
gcagagtatcgtcagaagaaaatctttgccctgcgagactggagccaagaagacgagcga
gacaggcaggcagccaaatctgatctcaactacattggcctggatggagacattggttgc
ctagttaatggggctggcttagcaatggccacaatggatatcatcaaacttcatggaggg
actcctgccaatttcttggatgtcggaggtggtgccactgcacagcaagtcacagatgca
tttaagctaatcacttcggacaaaaaggtgctggccatattggtgaatatctttggaggt
atcatgcgctgtgatgttattgcacaaggtattattatggcagttacggatctggagctg
aagattcctattgtggtccgattacaaggaacacgagttgatgatgcaaaagctctgata
gctgccagtagcctcaagatcctagcctgtgatgacttggatgaagctgcaaaaatggtt
gtcaagctttcagaaatcgtgtcgctggcaaaagaagctcaagtggatgtgaaattccag
ctgccaatctaa
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