Polyodon spathula (Mississippi paddlefish): 121320562
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Entry
121320562 CDS
T07273
Name
(RefSeq) integrator complex subunit 6-like isoform X1
KO
K13143
integrator complex subunit 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121320562
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121320562
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Gene cluster
GFIT
Motif
Pfam:
INT_SG_DDX_CT_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
121320562
NCBI-ProteinID:
XP_041114922
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Position
9:25580482..25616638
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AA seq
893 aa
AA seq
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MPVLLFLIDTSASMNQRAHLGTTYLDIAKGAVETFMKLRSRDPASRGDRYMLVTFEEFPC
GIKAGWKENHATFMHELKNLQAVGLTTVGQSLRTAFDLLNLNRLVSGIDNYGQGRNPFFL
EPSIIVTITDGSKLTSSSGVQDELHLPLSTPLPGSELTKEPFRWDQRLFALVLRIPGNMA
VEPEQMIGVPQDDSAITPMCEVTGGRSYSVCSQRMLNQCLESLVQKIQSGVVINFEKTGP
EPPPIEDGPLDTPKPGPQVWHSCHKLIYVRPNPKTGVPIGHWPIPEAFWPDQNSPTLVGV
YPSRTAHPQVRFSCIDSEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFVCNSAK
YSDLGQPFGYLKASTALNCVNMFVMPYDFPVLLPLLDDLFKVHKLKPTLMWRQSFEVYLK
TMPPYYIGPLKKALRMMGAPNLIAESMEYGLSYSVVSYLKKLSQQAKAESDRVIALVGKK
PVQENGVQVKNKASTLSLAHCKDFKQLLKGITGEAPHVLQELNMKEFTGFQIGILNKDLK
PQSFRNAYDIPRRSLLDHLSRMRSNLLKATQGLLKGQDEDQLHSIPIAQMGNYQEFLKLS
PSPLREVDPDQPKRLHTFGNPFKLDKKGMMIDEADEFVSGPQNKSKRPGDPSMQGVPKRR
RCMSPLLRGGRPLTPPAVNNHIGGKGPPSIPVTLAHPNLVKPIPVCKAPEENPNVFTDGV
VENHIGSQHSLETLPDPVPDLNSDTDPFNMKQLPAGAENHIGELGINRSGVDNLYTVSPT
GTNEDSEEGETCLEEGLHQSRKMKKLNNSKSEENNAELKVLITREIRKPGRRYERIFYFL
EQVQGSLHTRLMFLQNVIKEAARFKKRVLIEQLEGFLEEIHCRYNQMNHVDSI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttttacttttcctgatagacacgtccgcttctatgaaccagcgcgcccatctg
ggcactacctacctggacatagctaaaggggcagttgagacttttatgaagctccgatcc
cgagatccggcgagcagaggagaccggtatatgctggtgacttttgaggagttcccctgt
ggaatcaaggctggatggaaagaaaaccatgccacatttatgcatgaattgaagaatctc
caggctgttggacttaccactgttggccaatccctaaggacagcttttgatttattaaat
ctaaatagattagtttctggaatagacaactatgggcagggaagaaatccttttttcttg
gagccttcaattattgtcacaatcacagatgggagcaagctgaccagtagcagtggagtt
caggatgagctccacttacccctcagcacccctttacctggaagtgaattgaccaaggaa
cctttccgctgggatcagcgcctgtttgctctcgtcttaaggatcccaggcaacatggct
gttgagccagagcaaatgataggcgttcctcaggacgactctgccattactccaatgtgt
gaggtcacgggaggtcgttcgtacagcgtctgttcacagaggatgctcaatcagtgtctg
gagtcactggtgcagaaaatccagagtggggtggtaataaactttgagaaaacaggaccc
gagccgccacctatagaagatggacccctcgacacacccaaacccggaccccaggtttgg
cacagctgtcacaaactcatctatgtccgacccaaccccaaaacaggggttcctattggc
cactggccaatcccagaagccttctggcctgatcagaactcgccaacacttgtaggtgtc
tatccgtcccgtactgcccatcctcaggtccgcttctcctgtatcgactcggagcccatg
gtaatcgacaagcttcccttcgataaatacgaacttgaaccctcgcctcttacgcagtac
attctggagaggaaatcgccacatacttgttggcaggttttcgtctgcaatagtgcaaag
tacagtgaccttggccagccgtttggttatttgaaagccagtacagctttgaactgtgtt
aacatgtttgtgatgccttacgacttccctgtactccttcctcttctggatgatttgttc
aaagttcacaagctaaagccaactttaatgtggaggcagtcattcgaagtatatttaaag
acgatgccaccatattatattgggcctctgaagaaagctctccggatgatgggagcgcct
aatctaattgcagaaagcatggagtatggtttaagttacagtgttgtttcatatctcaaa
aagctaagccagcaggcgaaggcggagtctgatcgagtcattgcattggtaggtaaaaag
ccggttcaggagaatggggtgcaggtgaagaacaaggccagcaccctgtcgctggcgcac
tgcaaagactttaagcagctcctgaagggcatcaccggggaggctccacatgtcctacag
gagctaaacatgaaggagttcactggattccagatcggcatcctgaataaggatttgaag
cctcagagtttcagaaatgcatatgacatacccagaagaagtctgttggatcacttgtcg
agaatgagatccaaccttttaaaagccactcaaggactactgaagggacaagatgaagat
caattgcacagcattcctatcgcgcagatggggaattaccaagagttcctgaagctgtcg
ccttctcccttgcgagaggtcgaccctgaccagccaaaacgactgcacacattcggaaac
cccttcaaactggacaagaagggaatgatgattgacgaagcagatgagtttgtctcaggt
ccccagaacaagagcaagagaccgggagaccccagtatgcaaggggtgccaaaaaggaga
aggtgcatgtctccattgttgagagggggtcggcccctcactccaccagctgtcaataac
cacatagggggaaagggccccccatccatccctgtaacactggcacatccaaaccttgta
aaacccattcctgtctgtaaagctcctgaagaaaaccctaatgtgttcacagacggtgtt
gttgaaaaccacatagggagccaacactcacttgaaactttaccagaccctgttccagac
ctgaattcagacactgatcctttcaacatgaagcagcttccagcaggagcggagaaccac
ataggcgagctgggaatcaaccgttcaggggtcgacaacctttacacagtgagccccacg
ggaaccaatgaagacagtgaggagggggagacatgtctggaggagggtctgcaccaatca
cgcaaaatgaaaaagctgaacaactccaagagtgaagaaaacaacgcagagcttaaagtc
ctcatcaccagagagattagaaaaccaggcagaagatatgaaagaatcttttatttcctg
gaacaagtgcaaggcagtttacacacaagactcatgttcctacagaatgttatcaaagaa
gcagcaaggtttaaaaagcgcgtgcttatagagcaactggaaggattcttggaagaaatc
cactgccgatacaatcagatgaaccacgtggatagcatataa
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