Polyodon spathula (Mississippi paddlefish): 121320620
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Entry
121320620 CDS
T07273
Name
(RefSeq) ankyrin repeat and SOCS box protein 11-like isoform X1
KO
K10333
ankyrin repeat and SOCS box protein 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121320620
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121320620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
SOCS_box
ANK_LRRK2
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
121320620
NCBI-ProteinID:
XP_041115037
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Position
9:complement(29224435..29239801)
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AA seq
324 aa
AA seq
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MEDTSILTAFNNIYVAIFTLFCFKLFIKICLALLTQFYIVQGNRKEAARIAEEIYGITPG
SWADRSPLHEAAFHGRLLSLKTLIAQGFNLNITTIDRVSPLHEACLGGHVACAKVLLENG
ANVNSVTVEGITPLYNACCSGSAACVNVLLEYGARSQLEIQLPSPVHEATKRGHRECMEI
LLANGVNIDQEAPQLGTPLYVACTCQKTDCVKKLLELGANVDLGRLQDTPLHAAARKTST
KVVDLLIDYGADVKCRNVEGKRPVELAAPNTTVERALLQREGPAALTQLCRLCIRKHLGR
SRLHKVSKLELPGRLKEFLLYRIC
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaggatacttctatactgactgcttttaacaatatttatgtcgctatctttactttg
ttttgttttaagctgtttatcaagatttgtcttgctttgctgactcaattttacatcgtc
caaggaaacagaaaggaggctgcaagaattgctgaagagatttatggaataactccaggt
tcctgggcagatagatccccacttcatgaggctgcatttcatggcagacttttatcactc
aagaccctgattgcacagggttttaatttgaacatcaccaccatagacagagtctctcct
cttcacgaagcctgcttgggaggccatgttgcctgtgcaaaggttttattggaaaacggg
gctaatgtaaattcagtcacagttgaaggcatcactcctctgtacaatgcctgctgtagt
ggcagtgctgcctgtgtgaatgttttactggagtacggagccagatcccagctcgaaatc
cagcttccttccccagtacatgaagcaacaaagagaggtcatagagaatgcatggagatt
ctgcttgctaatggggtaaatatagaccaagaagccccccaactcggaaccccactttat
gtggcctgcacctgtcagaaaacagactgtgtgaagaaacttctagagttaggagccaat
gtggacctgggcagattgcaggacactccgcttcacgcagcagccagaaaaacaagcaca
aaagtagtggacttgctcatagattatggggcagatgtgaaatgcagaaatgttgaaggg
aagaggccggtggaactcgctgccccaaacactacggtggaaagagcgcttttacaacga
gaaggtcctgctgctctgacacagctttgtcgactttgtattcggaaacatttgggtcga
tcacgacttcacaaagtttccaagttagagcttccaggacgattgaaagaatttcttctc
tacagaatttgttga
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