Polyodon spathula (Mississippi paddlefish): 121320655
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Entry
121320655 CDS
T07273
Name
(RefSeq) ras-related protein Rab-9A
KO
K07899
Ras-related protein Rab-9A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121320655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320655
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pspa04031
]
121320655
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
121320655
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
121320655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
ATP_bind_1
PduV-EutP
AAA_7
FeoB_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
121320655
NCBI-ProteinID:
XP_041115118
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All DBs
Position
9:31038785..31048441
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AA seq
201 aa
AA seq
DB search
MSAKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTHLFHTIGVEFLNKDLEVDGHFVTMQI
WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNIGNWKKEFMYYADVKEPESFPFV
VLGNKVDVAERQVTSEEAQTWCRENGNHPYFETSAKDSTNVAVAFEEAVRRVLATEDRTD
HLIPTDTVNLHRKPKSSSSCC
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaatcctccctgttcaaagtcatcctattaggagatggcggagttgggaag
agctccctcatgaatagatacgtgaccaataaattcgacacccacctgttccacaccatc
ggcgtggagttcttaaacaaggacttggaagtagacggacactttgtcaccatgcagatc
tgggacactgccggccaggaaaggttcaggagcctgaggactcctttctaccgcggctct
gactgctgcctcctcacattcagcgtggatgacagccagagctttcaaaacatcggcaac
tggaaaaaggagttcatgtactacgccgatgtcaaagaaccagagagcttccccttcgtg
gtcctgggaaataaggtggatgttgcagagaggcaggtgacttcagaggaggcccagacc
tggtgcagagaaaacggcaaccacccctatttcgaaaccagtgccaaggattccaccaat
gtcgcagtagcctttgaagaggcggtccgtagagttttggccacagaggaccggacggac
cacctgatccctacagacactgtaaacctccataggaagcccaagtcaagctcttcctgc
tgttga
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