Polyodon spathula (Mississippi paddlefish): 121320669
Help
Entry
121320669 CDS
T07273
Name
(RefSeq) immunoglobulin superfamily member 10-like
KO
K24400
matrix remodeling-associated protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121320669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
LRR_8
C2-set_2
C2-set_3
Sp38
Ig_C17orf99
LRR_4
LRRNT
DUF5425
Motif
Other DBs
NCBI-GeneID:
121320669
NCBI-ProteinID:
XP_041115153
LinkDB
All DBs
Position
9:32538417..32550489
Genome browser
AA seq
2639 aa
AA seq
DB search
MAYLHTLSLVLIVALGLPEAVVSCPHPCACYLPTEVHCTFRSLIQVPSRIPKHAERINLG
FNNINSITENSLAGLRKLELLMIHGNDIHNIPNIVFKDLISLQVLKMSYNKLKIITGQTF
QGLSSLMRLHVDNNKIEFIHPDAFIGMTSLRLVHLEGNLLQQLHPNTFATFSFLQYFKMS
TVRHLYLSDNAIRTLPSEMFKTLPLLENVYLHGNPWTCDCRLNWLLNWNKNTRGVLKCKK
DKAYEGGQMCPTCSKPKQLTKKEIMQLDDVSCTKPTIQSPLKHSTISPGEDNESELMSVE
EYQEPFGNVTLNMTDEHGNKVDLNCRINSPSDSTKIKWDHINPQQIAINMTLSLDVECSI
DRERYEKLWKLIAYYSEVPVHLEKEIMLSKEPHLSFRYKQDTEKDAYYFTGVKANILAQP
SWLMQSSVNIQLNSKQSTTKNIKLAFITHFSQTLDTEITRRQRSKWVMIESKEETKTVVS
VVAGTLCQLNCNILSSGDPSIQWMLPDGTKVQAPHNSRDNKMSISTSGKLIIKTVDHSDS
GVYYCIAKVKGDLDIMAFRVSVQGSTVQSFAGEGNSLTKYTGEPIALPCNASAIPDAQLD
WILPNNNIVNVYSNMTRGYVFQNGTLFIQQSQISDSGYYRCVAVNQHGVDIFTAKLTVIR
KIVTRPSKRISMKPQSVSGVSTKIRVRVNEVEESSGDSDFQQPQYERLSSNSDMGSESGG
NQNKTPGYRNRNSGRRLRIKSRLKPKGSAVPEGQWTFDARRRVNVSNNKIDPQRWADILA
KIRERTAVKTTTSPSLDDRVVSRTSSTKNVKKMKSSASKHLNKNEHESSDNTEELSTDET
NFKDEELVPVTTPQSRFNEDNSHLAAEPTYSNKEIDHTYQISAPQTYTDLNIVSTTNTHI
LQSTSVPQETKFFVESSQENYVSEQDPKTSMATTMRNMDIQQNQIETSERNTVFIVSSFS
LVSVNTTEPERSSKQTTFSTTDSTLNEERNIFKIDRITPSFADSITQAPSPFSRTSTTEN
ISKQKNEQKHHSTHESRSPINAIDTHLSPEIMKSTAASTTTETTQVNSTTSHSRQRPYSR
RRLGNRRRYRPRPGQVIPHRPTTTMKTEMSVTHATERTSLPVIALTTTQTSVMMQSTNIK
SVIRESELERQLPKTSYNTKPTTTSTVYMSPSQTSTNTGVMSNSFIRSTNPPVNNVTVKS
NSPATQSSTSSTFVTPVVSRTFGSTISGRETEKTIKIQVATEAVPTSTPYVGSSLAISPT
DFINFGVTTTKALDLIITTTPNPGTIQNPKRWLSDKENQHKNIPKLVYPGQTTNHAVTAA
EDEPAIQKYTIGVLSIQPSSSAAPSRTSEHYSKITTVQVDQIPKSHIKPNTSNVNSHVKN
KEIQKTHGGEGFNNSLLVTANKPSIFTSSNQGFVLTKHIAVKVTAAPPVSFTRSWPQNPK
INMSFTNKPEIIAFAGQAPPPRKNYVSITMPTRPATTSASPPYRPHLPFPNRHSNRLQTG
PIAGSRNFGSNYIPDRQGTGVRLPSINQRYPYYQNGKNPYMVQKPNLPNIPTRTKIPATT
ATTQSKEQSTVPVRASTVSIPRPATSASLLGERTTTTTVASSTRIPPITRTTSLITTTTR
PHWNGVYTHRLPSAPFIPKVETPIQNGLNMPHPSPNIRVYRGRPQITTNNQHTVSVQAEM
DAVLPCDTVGEPKPFLTWTKVSTGAVIAINRKIQRFEVLKNGTFVIQNAQLQDRGQYLCT
AQNQYGVDKMIVTLIVLSQQPRMLVSHYQDVTVYLGDSANMECRSQGLPTPQISWILPDR
TIIRAATQTGSRIMLFENGTLSVTSTNFPDRGIYKCIASNAAGADSLSVRLHVTALPPVI
QQQRSENFTLAEGQTVYIHCTAKAAPLPNIRWILFDGTQIRPSQFVNGNLFVFPNGTLYI
RNLSSRDSGNYECMASNAVGASRRTVGVTVKKKTTTAKITATSPQRTDVIYGGALRLDCS
ASGDPGPRIIWRVPSKKLVDTQYSFDPRIKVYINGTLVVQMVTEKDEGDYLCVARNKMGD
DYVLLRVNVMMKPAKIKYKQETNKKVTYGGDLKVDCIASGLPDPDITWGLPDGTMVNSVM
QSDDSGIRSRRYVVFNNGTLYFNEVGMREEGNYTCYAENRMGKDEMKVHVKVVADSPEIK
NKTYSVVNMPYGQPISLKCIAKGEPAPRIIWLSPMNRIIPTSSDKYQVHIDGTLLIQKAQ
RFDNGNYTCLAKNSAGEDKKVIRVDVHVALPSINGHRNAVNTVKQTAIKEQRKLLDCKAE
GMPLPRVMWLLPENVVLPAPYYGSRITVHRNGTLDIKSIRKTDAVQLVCIARNEGGEARL
IIDLDVTENLEKPVLKNPLNETLALTVGTTVRMNCSAEGRPTPEIVWILPNGSQLTSGNQ
LYRVYHGHDGILHISSPSVTEAGTYRCLAKNEAGQTERTVSLEIGKKTEINNPYTGLVSI
INGENLLLHCSADGSPPPKLFWTLPNGMILSRPQTVGRYAVLQNGTLTVQHASVYDRGTY
SCKSVNEYGTSLMSVPVIVIAYPPRITNGPAPVTYARPGPAIQLNCMAIGIPKADITWEL
PDKTRLMVSSHARLFGNKYLHPQGSLIIQKPSQMDTGFYKCTAKNLIGSDSKATYVHVF
NT seq
7920 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcttcacacactctccttggtgctgattgtggcattagggttgccagaagca
gtggtatcctgtcctcatccttgtgcctgttacctgcccactgaagtgcactgcactttc
agatctttgatacaagtgccttccagaattcccaaacatgctgaaagaatcaatttaggg
tttaacaatataaattcaataaccgaaaactcccttgctggactcagaaaactggaactg
ctcatgattcatggaaatgacatacacaatatacctaacatagtctttaaagatttgata
tcattacaggtgctcaagatgagttataacaaattaaaaattataactggacaaaccttt
cagggactatccagtttgatgagattgcatgtggacaacaacaagattgaatttattcac
cctgatgcatttatcgggatgacctccttgcggctggtccaccttgaagggaacctcctc
cagcagcttcaccccaatacctttgcgacattttcattcctgcagtattttaaaatgtcg
acagtaaggcacctctatttgtctgataacgccattaggacactacccagtgagatgttc
aaaactctgcccctactggagaatgtctatcttcatggaaatccatggacatgtgactgc
agattaaattggcttttgaactggaataaaaacacaagaggtgttttaaagtgcaaaaag
gataaagcctatgaaggggggcagatgtgcccaacgtgctcaaaaccgaagcagctaaca
aagaaggagatcatgcagctagatgacgtttcttgcactaaaccaactattcagtcacca
ctaaagcacagcaccatctcaccaggggaagacaacgaaagtgaactaatgtctgtggaa
gaatatcaggagccatttggaaatgttacactgaatatgacagatgagcatgggaacaaa
gtagacttgaactgccgaatcaactccccaagcgattctaccaaaattaaatgggaccac
attaatccacagcagatcgctattaatatgactctttcacttgatgtggaatgctcgata
gatcgtgaaaggtatgaaaaattatggaagcttatcgcatactacagcgaagtacctgtt
cacttagaaaaagaaattatgctgagcaaagaaccacatttaagcttcagatataagcaa
gatactgaaaaggatgcatactattttacaggtgtgaaagcaaatatcttagcccagcct
tcctggctgatgcaatcgtctgtcaacatacagttaaacagcaagcagtcaaccacaaag
aatataaagctagcttttattactcacttttcacaaactctagatacagaaattacaagg
cgacagagaagcaaatgggtcatgatagaatcaaaagaagagacaaaaacagttgtgagt
gtagttgccgggactttgtgtcagctgaactgcaatatcctgagctcaggggatccttcg
atacagtggatgttaccagatggcactaaagtgcaggctccacacaacagcagagataac
aaaatgtctatttctaccagtggtaaactgatcattaaaacagtggaccattcagattct
ggtgtgtattactgcattgcaaaagtcaagggtgatctagatataatggcttttcgggtg
tcagtgcagggttcaacagttcagtcttttgcaggagaaggcaattctctaactaaatat
actggtgagcctattgctcttccatgcaacgcttctgctatacccgatgcacaacttgat
tggattcttccaaacaataatattgtgaatgtttattcaaacatgactagaggttatgtg
tttcaaaatggcacactattcatacagcagagccagatcagtgacagtggatattacagg
tgtgtagctgtaaatcagcatggggtagatatatttacagccaagttaacagttataagg
aagatagtaacacgcccatcaaaaaggatttccatgaaaccacagtctgtttcaggggtc
tccacaaaaattagagtaagagtgaatgaggttgaagagtcgtctggagattcagacttt
cagcaaccccaatatgaaaggttatccagcaacagtgacatggggagtgaaagtggaggt
aatcaaaacaaaacacctgggtatcgaaatagaaattctggaagaagattgaggataaag
agcagattaaaaccaaaaggaagcgctgtgccagaaggtcaatggacatttgacgcaagg
agaagagttaatgtgtcaaataataaaattgatccgcaacggtgggcggacattttggcg
aagatacgtgaaaggactgctgtaaaaacaacaacatcaccatcgttagatgatagggtg
gtttctagaacatcatcaaccaaaaatgttaagaaaatgaagtcctcagcatctaaacat
ttgaataaaaatgaacatgagtcctcagataacacagaagaattatccacagatgagacc
aatttcaaagacgaggaacttgttccagtaaccaccccgcaaagtagatttaatgaagac
aacagtcacttggctgcagaacccacatattcaaataaggagattgaccacacttaccaa
atctctgctccccaaacttacacagacttgaatattgtgagtacaaccaatactcatatt
ttacagtcaacctctgtcccacaggaaacaaaattctttgtagaatcttcccaggaaaat
tatgtaagtgaacaagatccaaaaacatcaatggccactaccatgcgcaacatggatata
caacaaaaccaaattgagacatcggaaagaaatactgtttttatagtttcaagcttttca
ttagtttctgtaaacacaacagagcctgaaaggtcatcaaagcaaactactttttctact
acagattcaacattaaatgaagaaagaaacatatttaaaatagacagaattacaccatca
tttgctgatagtattacacaagcacccagtccatttagcagaacatccactacagaaaac
atatcaaagcaaaagaatgaacaaaaacatcatagtacacatgaatcaagaagcccaata
aatgcaatagacacgcatttgtctcctgaaattatgaaaagcacagcagctagcactaca
acagagacaacccaggttaattcaaccacatcacattctcgtcagaggccatattcaagg
aggaggcttggtaacagaagaagatacagaccaagaccaggccaagttattccacataga
cctacaactacaatgaaaacagaaatgtctgtaacacatgcaactgagagaacatcttta
ccagttatagctcttactactacacaaacatcagtgatgatgcagtctacaaacatcaag
tcagtgatcagagaatctgaattagaaagacaacttccaaagacatcatataatactaaa
ccaacaactacctctactgtgtatatgtcaccaagtcagacatctacaaatactggtgta
atgtctaatagctttatcagaagtacaaatcctcctgttaacaatgtgaccgtcaaatca
aactctccagctacacagagttccacaagtagtacatttgttacacccgtagtttcaaga
acttttgggtcaaccatctcaggaagggaaactgaaaaaactattaaaatccaagttgct
acagaagctgttcctacatctacaccatatgtaggaagttcattggcaatcagtccaaca
gactttataaactttggtgttaccacaacaaaagctcttgacctaattatcaccacaaca
cctaacccgggaactattcagaatcctaagaggtggctgtcagataaggaaaaccagcat
aaaaacattccaaaattagtttatcctggtcagactacaaatcatgctgtcacagctgca
gaagatgaacctgcaatacaaaaatatactataggagtactgtcaatccaaccttcctcc
tcagcagctcccagcagaactagcgaacattattcgaaaattacaaccgtacaggtcgat
cagatccctaaatcccatataaaaccaaatacatctaatgtaaattcacatgtgaaaaac
aaagagatacaaaaaacacatggaggagaaggattcaataacagccttctagtaacagct
aataaacccagtatatttactagctctaaccaaggttttgttcttacgaaacatattgct
gttaaagtaacagcagcacctcccgtttcatttaccagatcctggcctcagaatcctaaa
ataaatatgtctttcaccaacaaaccagaaataatagcatttgcaggacaggccccacca
ccaaggaaaaattacgtctccatcaccatgccaacaagaccagcaacaacttcagcttct
ccaccatacagaccacatctgcctttcccgaatagacattccaacaggctacaaactgga
cctatagcaggctcaagaaactttggatcaaattacatccctgacaggcaaggtactggt
gttagactgccaagcataaatcaaaggtacccatattatcagaatggaaaaaatccttac
atggtacagaaaccaaaccttcccaacatacccactaggaccaaaatacctgctactact
gccacaacacaatctaaagaacaaagtacagttccagtcagagcatcaacagtctcaata
cctagacctgctaccagtgcttctcttttaggagaaaggacaaccactacgacagtggca
agtagcaccagaatcccaccaataacaagaactacgtcactcattacaactaccactcgc
ccacactggaacggtgtttatacccacaggctcccaagtgccccattcattccaaaagta
gaaacacctattcaaaatggcttaaacatgccacatccttcacccaatataagagtctat
cgaggaagacctcaaatcaccacaaacaaccagcatacagtgtccgttcaagctgaaatg
gatgctgtgctcccatgcgatactgtgggagaacccaaacctttccttacatggactaaa
gtatctactggagctgtgattgcaattaacagaaagatccaaagatttgaagtactgaaa
aatgggacttttgtgattcaaaatgctcaacttcaggaccgtggacagtacctttgcact
gcacaaaaccaatacggtgtggataaaatgatagttactttaattgttttatctcagcag
ccgagaatgcttgtgtcccactatcaagatgttacggtttatcttggagactctgcaaac
atggagtgcaggtcacaaggactgccaacccctcagatttcatggatattaccagacaga
acaatcattcgtgcagccacccaaactggcagtcgaataatgctgtttgaaaatggaact
ttaagtgtcacatccactaattttccagacagaggaatttacaaatgtatagcaagtaat
gcagctggggcagacagcctatctgtcaggcttcatgttacagcattgcctcctgtgatt
cagcaacaaaggagtgagaactttacccttgcagaaggacagactgtttacattcactgc
actgccaaagctgctcctctgcctaacattcgatggatcctcttcgatggaacacagatc
cgaccatctcagtttgtgaatggcaacttgtttgttttccccaatggaaccctgtacata
cgcaacttatcctcaagagacagtgggaattatgaatgcatggcaagcaacgcagttggg
gcttccagaaggacagtaggcgtgacggtaaagaagaaaacaaccacagcaaaaattaca
gcaacatcgcctcagagaacagatgttatttatggaggtgcgctgaggctggactgctct
gcttcaggtgatccaggtccaagaataatatggagagtgccttcaaagaaacttgttgat
acacagtacagttttgatcccagaataaaagtgtatattaatggaacgttagtggttcag
atggttactgaaaaagatgaaggagactacttgtgtgttgccagaaacaagatgggagat
gattatgtgctactgagagtaaatgtgatgatgaaacctgcaaagatcaaatacaaacaa
gaaaccaacaagaaggtgacatatggaggagatttgaaagttgactgtatagcttcaggc
ctgcccgaccctgacatcacttggggtcttcctgatggtactatggtcaacagtgtaatg
cagtcagatgacagtggaatacgcagcagaagatatgtggttttcaacaatggcaccctt
tacttcaatgaagttggaatgagagaggaagggaactatacctgctatgcagaaaaccgg
atgggaaaagatgaaatgaaggtccatgtcaaggtggtggctgattccccagaaatcaaa
aataaaacatactctgttgtaaacatgccatatggacagcctatttcattgaaatgcatt
gcaaaaggagaacctgcccccaggataatttggctttctccaatgaaccgaatcatccca
acttcatctgataagtatcaggtacacattgacggtacacttctgatacagaaggcccaa
aggtttgataatggaaactacacctgccttgctaaaaactcagcaggggaggataaaaaa
gtaatcagagtggatgttcatgttgctctgccatccattaatggccatagaaatgcagtg
aacacagtcaagcaaacagcaatcaaggagcaacgcaaattattggactgtaaagctgaa
gggatgccgctcccccgcgtcatgtggcttttgccagaaaatgttgttcttcctgcgccg
tactatggaagcaggatcacagtgcatcgtaatggaactcttgacattaaatccataaga
aaaactgatgcagtgcagttggtctgcatcgcacgcaatgaaggaggggaggccaggctt
attatagacctagatgttacagaaaacttggagaaacctgtacttaagaacccactaaat
gagacactggcattaactgttggtaccactgtaagaatgaattgctctgcagagggtaga
ccaacaccagaaattgtctggatccttcccaatggatcacagcttacaagtggcaatcag
ttatacagagtgtaccatggacatgatggcatcttgcacatcagcagtccctctgtcaca
gaagcaggcacttatcgttgcttggcaaagaatgaagcagggcagacagaaagaacggtc
tcattagaaattggtaaaaaaacagagattaataacccttatactggtttggtaagcatc
attaatggggaaaacctactgctccactgtagtgctgatggaagtcccccacccaaactt
ttttggacattacccaacgggatgattcttagccgtcctcaaacagtgggccgctatgca
gttctgcaaaatggaactcttactgttcaacacgcatccgtctatgacagagggacctat
tcttgcaagtcagtcaatgaatatggaacctctctcatgagtgttccagtgatagtcata
gcatacccaccgcggattaccaatgggccagcacctgtgacgtatgccagacccggacct
gcaatccagctaaactgcatggccataggaattcctaaggcagatataacatgggagctg
ccagacaaaacacgtctaatggtgtcatctcatgcacggctgttcggcaacaagtacctc
caccctcaaggttcactaattatccagaagccatcccagatggacacaggtttttacaaa
tgcactgctaaaaatctaataggaagtgattcaaaagcaacatatgttcatgtattttaa
DBGET
integrated database retrieval system
