Polyodon spathula (Mississippi paddlefish): 121320735
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Entry
121320735 CDS
T07273
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121320735 (ttf2)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121320735 (ttf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Motif
Other DBs
NCBI-GeneID:
121320735
NCBI-ProteinID:
XP_041115253
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Position
9:35706937..35721757
Genome browser
AA seq
1222 aa
AA seq
DB search
MEEVVCDKHESICLLKTGVRDGPNKGKSFYLCGAQRGDPCDFTRRTDIPPSHCLLHEDSL
VELQALMKQEDRQHYRLFFRCVEGKTERRKWCGNIPWQHPELEKKIPTSDRESEFLKPRK
ERNPFKAQNGNGEPSDWKVLHENGGGKDEERKGGAESGCETFSKDPTAYTDWRNRQLPAG
MKVKKRSSEEVENSGKNPKEAMDKSKTGEDNSPADTSEDKCETDHLEIEEASHLDNGQLK
GTPVEGKKPVRISKHSDLKKHEKPNKGEKSEYSTDTKERESIGEMRLKDSSTKERQSDQK
KDHASETHKKEQKQKEASRENSSEFSERTGVTRKESPKTKETSVYLERKKETSNIEPLKG
QPSADARGTHKSSGEHVLEKGKRVEQKHGDVIVIDDEDDVMGFAQARQKQPVAVAPVKPA
VSMVQKTITSFPGFNSASQVQPNSMALHNQLSTQLKQKKATMTTVNLSALPDKGQRLLNQ
VKELEDALGSLNLTPASDCDGNQVGTGNSLSMHQVSVPSQFNPFCRTSSDQKGIILLDKP
LPYQEAHSGTLGLQFHGGPSFSQGYSQTYGVNSQYSALYGGRMTDDRRLAVRNATADAID
HLHKSLESCPTAETEAEDPKGLKVTLLPHQKQALAWLLWRENQKPCGGILADDMGLGKTL
TMIALILSQKAKEKKEEKEDKKQEGWISKNDSSCVNSQGTLIICPASLIHHWKKEIERHV
KGSKLNVYVYHGANRERNAKVLAEYDVVITTYSLVSKAIPVKKEDGDKPAKDDDDQDVSL
PRQPLVQVTWRRIILDEGHNIKNPRVQTSMAVCKLRAGKRWVVTGTPIQNNLLDMYSLLK
FLRCSPFDEYKLWKNQVDNGSKRGGERLNILTKTLLLRRTKDQLDSSGKPLVSLPERCCQ
THRLKLSEDEQLVYDVVFAQSRSALQSYLKRHEGGESKHSGQADNPFDKVAREFGASQSG
SQSKPQPQASSTVHILSLLLRLRQCCGHLSLLKKTLDHTELQNEGITLSLDEQLNALSLS
EVSSPDLKSTVSLNGTMFKSDLFDDTRESTKISAILAELKAIKSGPVTQKSVIVSQWTSM
LRIVAVHLDRIGLRCATIDGSVNPKKRMDLVEEFNTNPKGPQVMLVSLCAGGVGINLIGG
NHLFLLDMHWNPALEDQACDRIYRVGQIRSVTIHRFVCEGTVEDKITELQDKKKELAKKV
LSGTGDSFTKLTLADLKILFGV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggttgtgtgtgataaacacgaaagcatttgcctgctgaagactggtgttcga
gatggacccaacaaagggaagagtttttatctgtgtggagcgcaacgtggggatccctgt
gactttacaaggcgaactgacatccctccatctcactgcttgcttcacgaggactcattg
gtggaactacaggctcttatgaaacaggaggatagacaacactacaggttattcttccgg
tgtgttgaaggaaagactgaaagaagaaagtggtgtgggaatattccatggcagcaccct
gaactggaaaaaaaaatccccacctctgacagagaatctgagttcctcaaacctcgaaag
gagaggaacccgttcaaagcccagaatgggaacggggaaccctcagactggaaagttctt
catgaaaatggaggtggtaaagatgaagaaaggaagggaggggcagagagtggatgtgag
actttcagcaaagatcctacagcatatactgattggaggaacagacaactgccagcaggc
atgaaggtaaagaagaggtcatctgaggaggtagagaacagtggtaaaaatcctaaggag
gcaatggacaagagtaaaacaggggaggataattcacctgcagatacaagtgaagataaa
tgtgaaacagatcatttggagatcgaagaagcttcccaccttgataacggacagttaaag
ggcacaccagtcgaagggaagaaacctgtgagaataagtaaacattcagacctgaaaaaa
catgagaaaccaaacaaaggggaaaaatccgagtactccacagacacaaaggaaagagaa
agtattggtgaaatgcgcttgaaagattcatcaacaaaggaaaggcaatcggatcagaaa
aaagaccatgcaagcgagactcacaaaaaggaacaaaagcagaaggaagccagtcgagag
aacagcagtgaattttcagagcgaactggagtgaccagaaaagaatcgccaaagacaaaa
gaaactagcgtttatctggagaggaagaaagagacttcaaatatagagccattgaaaggg
cagccttcagctgatgcaagaggaacacacaagtcatctggtgaacatgtgctggagaaa
ggaaagagagttgagcagaagcatggggatgttattgttattgatgatgaggatgatgtg
atgggttttgcacaggctagacagaagcagccagttgcagtggctccagtgaagcctgct
gttagcatggtgcaaaaaactattacatctttccctggatttaattctgcatctcaggta
caacctaattctatggctctgcataaccaactttcaactcaactcaaacagaagaaggcc
actatgacaactgtgaatctctcggctcttcctgataaaggccaaaggcttttaaaccaa
gttaaggaactggaagatgcactaggctcactgaatttaactcctgcttcagactgtgat
gggaatcaagttggcactggaaacagtttgtcaatgcatcaggtatccgttccaagccag
tttaatccattctgtcgaaccagtagtgatcagaagggaatcatcctattggacaagcca
ctgccctatcaggaagctcattcaggaactctggggctgcagtttcatggaggtccttcc
tttagccagggctatagccagacatatggagtaaactcacaatacagcgctttgtatgga
ggtcgtatgactgacgacaggcgcctggctgtccgtaatgcaactgctgatgctatcgac
catctacataaatctctggagtcctgtcctactgcagaaacagaagctgaggacccaaag
gggctcaaagtcaccctgctgcctcaccagaagcaggctttggcatggttactttggcgg
gagaatcaaaaaccatgtggaggaattctggcggatgatatgggtctggggaaaacgctg
acgatgattgcactgattctgtctcagaaagccaaagaaaagaaggaggaaaaggaagac
aaaaagcaggagggatggatttcaaaaaatgattcgtcatgtgtgaactcacaggggact
ttaattatctgccctgcctctcttatccaccactggaagaaagagatagagaggcatgtc
aaaggcagtaaactgaacgtgtatgtgtaccatggagcaaacagagagaggaatgcaaag
gtccttgcagaatacgatgtggtaattacaacttacagtctggtgtccaaggcgattcca
gtgaagaaggaggacggcgacaaaccagctaaagatgatgacgaccaagacgtttcctta
cctcgtcaacctctagtacaagtaacctggcgccgaatcatcctggatgaaggtcacaac
atcaaaaaccctcgtgtgcagacctccatggctgtgtgtaaactacgggctgggaagcga
tgggttgtgactgggactcccattcagaacaacctgctcgacatgtactcgctgctgaag
tttctcaggtgttcgccctttgacgaatataagctatggaagaatcaggtagacaatggc
tcaaagaggggaggagaaagactgaatattctcacaaaaacccttcttctgcggagaacc
aaagaccagcttgattcctctggaaaacctttggtctctctgcctgaacgttgctgccaa
acccatcgcctgaaactttctgaggatgaacagttggtctacgatgtagtttttgcacag
tccagatcagcactacagtcgtatctgaagagacacgaaggtggggagtccaaacacagt
gggcaggctgataacccctttgacaaagtggcacgagagtttggtgcaagtcagtctggt
tcccagtcaaagcctcagccccaagcctccagcacagtgcacattctatccctgctgctg
cgactgcggcagtgctgcggacacctttccctgcttaaaaagaccctggatcatacagag
cttcagaatgaaggcatcactctttcactggatgagcagctcaatgccctgtccctctcg
gaagtgtccagccctgacctgaaatctaccgtgtctctgaatgggaccatgtttaaatct
gacctttttgatgacaccagggagagtactaagatatctgcaatacttgctgagctgaaa
gcaattaaaagtggtccagttactcaaaaaagtgtgattgtatcacaatggacaagcatg
ctccgtattgttgctgtgcacctggacagaattggtttacgttgcgctacaatcgatgga
tctgtcaatcccaaaaagagaatggatcttgtagaggaattcaacaccaaccccaaagga
ccacaggttatgctggtgtctctctgtgctggaggagttggcataaacctgattggagga
aaccacctcttcttattggacatgcactggaacccagctctggaggaccaggcctgtgac
cgtatttatagggtaggacagatcagaagtgtaaccatacacaggtttgtgtgtgagggg
actgtagaagataagatcacagaacttcaagacaagaaaaaagaactggcaaagaaagtg
ctgtcgggaacaggagactccttcaccaaacttacattggccgacctcaagatccttttt
ggtgtctag
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