Polyodon spathula (Mississippi paddlefish): 121320757
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Entry
121320757 CDS
T07273
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121320757
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121320757
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
121320757
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GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
121320757
NCBI-ProteinID:
XP_041115297
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Position
9:complement(33203772..33212737)
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AA seq
589 aa
AA seq
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MAIHVEGLVAIILFYLLILFVGIWAAWKNKNSGIAAGTDRSETIMVGGRDIGLFVGGFTM
TATWVGGGYINGTAEYVYLPGFGLAWAQAPFGYALSLVVGGMFFAKPMRSRGYVTMLDPF
QQIYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIVDMNINTSVIVSALIAIFYTLV
GGLYSVAYTDVVQLFCIFLGLWVSVPFALSNPAVSDIGVTAYKYVHQEPWLGSINPSDIY
MWLDNFFLLMLGGIPWQVYFQRVLSASSATYAQVLSFLAAFGCLVMAVPSVLIGAIGAST
DWNQTSYGPVQPKMKEESDMILPIVLQHLCPSYISFFGLGAVSAAVMSSADSSILSASSM
FARNIYQLAFRQTASDREIVWVMRITIFVFGAVATAMALLTGTVYGLWYLSSDLVYVIIF
PQLLSVLFVKGTNTYGSVAGYIFGLLLRISGGEPYLKLPPFIYYPGWTEQVKEHPLTGAV
EHIIVQKFPFKTISMLSSFLANVAFSYLFKYLFESGSLSPKYDFFDAVLTKHSKENMDKT
TLVNSDNIVLSELAPVKPRHSTTVAAGFVNKEALSDEDTSPNSSNNELD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccacgtggaagggctggtagcaataattctgttctatctgcttattctgttt
gttggaatatgggctgcgtggaaaaacaaaaactccgggatagcagccggaacagatcgc
agtgaaaccatcatggttggcgggagagatatagggttatttgttgggggatttacaatg
acagctacatgggtcggcggaggatatatcaacgggactgcagaatatgtatacttaccc
gggtttggactagcctgggctcaggctccattcggatacgcacttagccttgtagtaggc
ggtatgttttttgctaaaccaatgcgctccagaggctacgttaccatgctggacccgttt
cagcagatctacggtaaaagaatgggagggctactcttcatccccgctctcatgggagag
atcttctggtcagcagctatcctatcagcactaggtgcaactttgagtgtgatagtggac
atgaatatcaacacgtcagtcattgtctctgctctcatagcaatcttttacactctggtg
ggagggttgtattctgttgcctatacagatgtggttcagcttttctgcattttcttgggg
ctgtgggtcagtgtgccttttgcattgtccaacccagccgtgtcagatataggagtgacc
gcttataaatatgttcatcaggagccctggctgggatccatcaacccatcagatatatac
atgtggctggacaacttctttttattaatgctgggggggattccctggcaggtgtatttc
cagcgggttctttctgcctcctcagctacctatgctcaagtattgtccttcctggcagcg
ttcggctgtttggtgatggctgtgccatctgttcttattggcgcaataggtgcatctaca
gactggaatcagacttcgtatgggcctgtgcagccgaagatgaaagaggagtcagacatg
attctgccaatagtactccagcatctttgcccctcatatatttcctttttcggtcttggg
gcagtgtcagctgcagtgatgtcatctgctgattcatcaatcctatctgcaagctccatg
tttgcccgtaacatctaccagcttgcatttagacaaacggcatcagatagagagatcgtg
tgggtaatgaggattaccattttcgtgtttggagccgtggcaacagccatggccctgtta
actggaacagtgtacggcctatggtatttgagctcagatctcgtctatgtcatcatcttc
cctcagctgctgagtgtgctcttcgttaagggaacaaacacgtatgggtcagtggcggga
tatatctttggtttgcttttgaggatcagtggaggagaaccatatcttaaactccccccc
ttcatttactatcccggctggactgaacaggtgaaagaacatcctctaacaggagcagta
gaacacatcattgttcagaaattcccattcaaaaccatctcaatgttgtcctcttttttg
gcaaacgtggcattctcctacctatttaagtatctttttgaaagtggttcactgtctcct
aaatatgacttcttcgatgctgttttgacaaagcacagcaaagaaaacatggataaaacc
actttggttaacagcgacaatatcgtactgtctgaattagcacctgtcaaaccaagacat
agcactacagtcgctgcaggattcgtaaacaaggaggctttaagtgatgaggatactagc
ccaaattcgtcaaacaatgaacttgactga
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