Polyodon spathula (Mississippi paddlefish): 121320790
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Entry
121320790 CDS
T07273
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121320790 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121320790 (gtf2e1)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
121320790 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
121320790 (gtf2e1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF1373
Motif
Other DBs
NCBI-GeneID:
121320790
NCBI-ProteinID:
XP_041115354
LinkDB
All DBs
Position
9:37307216..37323387
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AA seq
442 aa
AA seq
DB search
MTEPEVLTEVPASLKRLAKQVVRGFYGVEHALALDILIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFIKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESALPKKDARTLVARF
NDQIEPIYVLLRETEDINLSHDLLEPEPAEIPALKQSRERAAAALGASAGAHRENWATKG
AYEDFYTQNVTISMEEQEEQKRSASEGKTPKERPVWLTESTVKGAYSEADDLKEGGMGVD
GLRDHDEGQSMQLDENEEVMRALLIHEKRSAGMNLASAGGVGAGAGVSLSGANASDSESD
TSESDEESPPHPMAQHYRRNEDDDDDDDEFEEVGNEPTVLVAGRPHSYSEVSQQPELVTQ
MSPEEKEAYIEMGQKMFQDMYE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacggagcccgaggtactgacagaggtgcctgcctccctgaagcgcctggccaagcaa
gtggtgcgcgggttctatggggtggaacatgcgctggccctggacatcctcatccgaaac
ccttgtgtaagagaggaggacatgctggaactgctcaagtttgacaggaagcagctgcgc
tcggtcctgaataccctgaagggggacaagttcatcaagtgccgcatgagggtggagacc
gctcccgacgggaagaccacccggcacaactattacttcatcaactacaggctgctcgtc
aacgtggtcaagtacaagctggaccacatgaggaggcggattgagacggacgagagggac
tccaccaaccgtgcctccttcaagtgcccctgctgcttcagcaccttcaccgacctggaa
gcgaaccagctctttgaccccatgacaggaacattccgttgtactttctgtcagacggag
gttgaagaggatgagtctgctttgccgaaaaaagatgccaggacactagtggccaggttt
aacgatcaaatcgagccaatttatgtcctgctgagagaaactgaagacatcaatctgtcc
catgatttactggaaccagagccagctgagatcccagcactcaagcagagcagggagcga
gctgcagcggctttaggggcctctgctggagcccaccgggagaactgggccaccaagggc
gcttacgaggacttctacacccagaacgtcactatcagcatggaggagcaggaggaacag
aagcgctcagccagcgagggcaagactcccaaggagaggcctgtgtggctgacagagagc
accgtcaaaggggcatacagcgaggctgacgacctgaaggaaggtggaatgggtgttgat
ggtttacgggatcatgatgaagggcagagcatgcagctggatgagaacgaggaggttatg
cgggccctgctgatccacgagaagaggagcgctggcatgaacttggcgtcggcagggggt
gtgggtgcaggggctggcgtgtcgctctcaggcgccaatgccagcgactcggagagtgac
accagtgaatctgatgaggaatctcctccccaccctatggctcagcactacagaagaaac
gaggacgacgatgatgatgatgacgagtttgaggaagtgggcaatgagcctacagtttta
gtggctggtcggccccactcctacagtgaggtcagtcagcagcccgagcttgtcacacag
atgagccctgaggagaaagaagcttacattgaaatgggacaaaagatgttccaggatatg
tatgagtaa
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