Polyodon spathula (Mississippi paddlefish): 121320791
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Entry
121320791 CDS
T07273
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320791 (stxbp5l)
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121320791 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
121320791 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_Prp19
WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
RAB3GAP2_N
Beta-prop_NUP159_NUP214
Beta-prop_EML
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
121320791
NCBI-ProteinID:
XP_041115356
LinkDB
All DBs
Position
9:37347578..37497664
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AA seq
1263 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGSASGTSTCPGGTTGVPAVGVTPRETEVQETLASENFQICKT
VRHGFPYQPTALAFDPVQKIVAIGTRTGGVRILGRPGVDCYCQHDSEAAVLHLQFPINEG
ALVTACADDTLHLWNLRQKRPAILHSLKFNRERITFCHIPFQSKWLYVGTERGNTHVVNI
ESFILSGYIIMWNKAIELATKTHPGPVVHLSDSPRDEGKMLIGFESGTVVLWDLRTKKPD
FRFYYDEAIHSISWHHEGKQFMCSHSDGSLTMWNLKNTAKPFQITFPHAKSQRDGKKPDP
CKPILKVEYKTSRSSEPFIIFSGGLSYDKAGRRPSLTIMHGKSITVLEMDHPIVEFLTLC
ETPYPNEFQEPYAVVVLLEKDFIVVDLTQSHFPIFENPYPMDIHESPVTCTAYFADCPPE
LIPALYSVGAKHKKQGYSNKEWPVSGGTWTLGTQTYPEIIITGHADGSIKFWDGSAITLE
MLYKLKTSKVFEKQKVGEGKQVAEIVEEDPYAIQMISWCPESRILCVTGISAHVILYRFS
KHEATTEIVSLEVRLQNDVEDIITPEATENISPYTEPSQPITGSPRNVSPEGIKDSIPCL
KVKSRPVRMPQGYQAELVIQLVWVDGEPPQQIASLALNSAYGLVAFGNSNGLAVVDFIQK
TVLLSMGTIDLYGSSDPYPRQLRSPRRSKQLTADTFCMRGLSNIYSDSKKRIRTSHQSLS
ELSDSPVSLELERCKSPTSVPPPTTPHNDPRTFPDTPANVKASHCSPVFYLLDNVKGPRK
LSLPTDLKTDLDNVNGHCTSPTSQPCSTGKRVSATEGAKLNRWGPSRPPFRKVQSAACME
ISLPASHTEVGYASRRAMLQQLHGISIYSQDEHHSTSYTWSEKESRDNSFSRSRSSSVSS
IDKESKETITALYFMDSYGRKNDGTLSPCLWVGTSLGVVLVISLNLPSGEEQRQSEPVMV
APSGTVLMLKGAVLTFSSVDCAGGLIHPPYEVWRDPNSMDDNEKPRKRKLVTFSPSSSQD
MGDYHFAVICSEKQAKVYSLPSQNCLYAHSITESSFVLRADVVTVCNSVCLACFCANGHI
MTLSLPSLRPMLDVNYLPLTDMRIARTFCFTNGGQALFLSSPTEIQRITYSQEMCENLQD
MLGELFTPVETPEAQNRGFLKGLFGGSGQTFDREELFGEAAAGKASRSLAQHIPGPGSME
GMKAAAGGVVGDLARARIALDERGQRLGELEERTAAMMGSAESFSKHAHELMLKCKDKKW
YQL
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaattttcgaaaggttttggatgggttgactgcctcctctccaggcagc
gctagcggaacttcaacatgcccaggtgggaccactggtgtgcctgcagtaggtgtgact
cccagggaaacagaagttcaagaaaccctcgcttcggaaaactttcagatctgtaagacg
gtacgtcatggcttcccatatcagcccactgccttggctttcgacccagtgcaaaaaatc
gtggccattggaacaagaacaggaggtgtacgaatactgggcagacctggcgtcgattgc
tattgtcagcatgacagcgaagcagctgttctacacctccagtttccaatcaatgaggga
gctcttgtcactgcatgtgctgatgacactcttcacctctggaacctgcgacaaaaacgt
ccagcaatcctccattctctcaaattcaaccgagagcggattaccttctgccatattcca
ttccaaagtaaatggctgtatgtgggtacagagagaggaaatacacatgttgtaaatatc
gagtccttcatcctctcaggatacatcatcatgtggaacaaggcgatagaactagcaaca
aagacccacccaggccctgtggtgcacttaagtgacagtcccagggatgagggaaagatg
ctgataggctttgaaagtggaacggtagtcttgtgggacctccgaacaaaaaaaccagac
ttcagattttactatgatgaggccatccattctataagctggcatcatgaaggcaagcag
ttcatgtgcagccattctgacggcagtctgaccatgtggaatctgaaaaacactgccaaa
cctttccagatcacattccctcatgcaaaaagccagagagatggaaagaaaccagaccca
tgcaagccaatcctgaaagtggaatacaagacatcaaggagcagtgagccatttattatc
ttctctggagggctgtcatatgataaagcaggtcgaagacctagcttgacaatcatgcat
ggtaaatctatcacagtgctggaaatggatcaccccatagtggaattcttaacactttgt
gaaactccctatccaaacgaattccaggagccttatgcggtagttgtactgcttgaaaag
gactttatcgttgtggacctaacacaaagccactttcctatctttgaaaacccatatcct
atggatattcatgaatccccagttacctgcacagcatactttgctgactgccctccagag
ctaattcctgctctttactctgtaggtgccaaacacaaaaagcaaggctacagcaataag
gaatggccagtcagtggtggcacctggacactgggaacacagacatatcctgaaattatt
attacagggcatgctgatggatcaataaagttttgggatggctctgccataacccttgag
atgctgtacaagctgaaaacatccaaggtgtttgaaaagcagaaggtgggagaggggaag
caggtagcggagattgtggaagaggacccatatgccatacagatgatcagctggtgtcct
gaaagcaggatcctatgtgtcacaggcatctcagctcatgtcatactttacagattcagt
aaacacgaggctactactgaaatagtgtcactagaggttcggcttcagaatgatgtggag
gacattatcaccccagaggcgactgagaatatctctccatacacagagccttcccagccc
attacaggaagcccccgcaatgtctctccagagggaattaaggacagcatcccctgcctc
aaggtgaagtctcgtccagtaagaatgcctcaaggctaccaggcagaactggtaatacag
ttggtgtgggtagacggagagcctccccaacaaatagcaagcctggctctgaactcagcc
tatggcttggttgcatttgggaattccaatggcctagctgtagtggatttcatccagaag
acagttctgctcagcatgggaaccattgacctttatggttccagtgacccatacccgcgg
cagcttcgctctccacgcagaagcaagcagctcacagcagacaccttttgcatgcgcggc
ctgtctaacatttattcagattcaaagaaaaggattcgtacatcccaccagagtctatct
gagctgtctgacagccctgtttccttggagctagaacgctgcaagtctcccacatcagtt
cctcccccaaccacacctcataatgatccccgcacctttccagacaccccagcaaatgtg
aaagcaagccactgcagcccagtgttttacttgctggacaatgttaaaggaccaagaaag
ttaagtctgccgacagatcttaagactgatcttgataatgtaaatggacattgcactagc
cccacctcacagccctgcagcactgggaagcgcgtctctgccactgaaggtgctaaactg
aaccgctggggtcctagccgaccccctttccgaaaagtacagtctgctgcttgcatggag
atctctttgcctgcctcccacacagaagtaggttacgcatcaagacgggcaatgcttcag
caattacatggaatcagtatttactcgcaagatgaacatcactctaccagttacacatgg
agtgagaaagaaagccgggacaattccttcagccgctcccgtagctccagtgtgtccagc
attgacaaggaatccaaggaaacaataacagcactgtacttcatggactcgtatgggcgt
aagaacgatgggaccctctcaccatgcctttgggtcgggaccagccttggggtggtactg
gtcatctctttaaacctgccttctggtgaggaacagaggcaaagtgaaccagtcatggtg
gcacccagtgggaccgtgctgatgcttaaaggagcagtgctgacgttttcatctgttgac
tgtgccggtggcctgatccaccctccctatgaggtgtggagggacccgaacagcatggat
gacaatgagaaaccccgcaagcgtaaacttgtaaccttctcgccctcctcttctcaggat
atgggggattaccattttgcagtcatctgttcagagaaacaggccaaagtctactcactg
ccttcccaaaactgcctttacgcacatagcatcacagagtcgtcgtttgtgctcagggca
gatgttgttacagtttgtaatagtgtttgcctggcttgcttctgcgcaaatggacatatc
atgacactaagcttgcctagccttcgaccaatgctggatgtaaactatctacctttgaca
gacatgaggattgctcgaactttctgctttacaaatggagggcaggcgctgttcctgagc
tctcctacagagatccagcgcattacctacagccaggagatgtgtgaaaacctgcaggac
atgttgggagagttgtttacaccagtggaaaccccagaggctcaaaacagaggatttcta
aaaggactgtttggaggaagtggacaaacatttgacagagaagaactctttggtgaggca
gctgcaggaaaggcctcacggagtcttgcacagcatattccaggccctgggagcatggag
gggatgaaggctgctgctggaggggtagttggagacctggcacgggcccgcatcgctttg
gatgagagagggcagagactgggagaactggaggaacgcacagctgccatgatggggagc
gcagagtcattttccaaacacgcacatgagctgatgctaaaatgcaaggacaagaagtgg
tatcaattgtaa
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integrated database retrieval system
