Polyodon spathula (Mississippi paddlefish): 121320820
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Entry
121320820 CDS
T07273
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320820
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121320820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
Spectrin
SH3_2
Spectrin_SESTD1
CRAL_TRIO
hSH3
Motif
Other DBs
NCBI-GeneID:
121320820
NCBI-ProteinID:
XP_041115417
LinkDB
All DBs
Position
9:39308772..39371228
Genome browser
AA seq
1222 aa
AA seq
DB search
MSLHGLLKDGQETHYSIFTQLSQFIQSLSATVLGSLPRGNWKTSSRPEWSDEIMQQETSP
LCAVDIKEVIKKQFAYLSGGRGEDGCPIITFPEYPSFSEIQEREIHDVLTYLTSIPSLQA
AGVGFILIIDRRQDKWTSVKGTLLSIAGSFPGILQLILVLRPTGLFQRALSDIVFRFNKD
EFKMKVPIIMLSSVTELHTYIDRTQLTQELGGTLAYCHDEWLSRRTAIEGFALMVKKTAQ
MLQSFGTELAETELPNDVQATSSLLEVHTEKKEKMKEDLRQALNQGHGLLESINEPVTKD
PGYILNQDELENLATVERLLGQLNETETAFDEFWDKHQSKLEQCLQLRHFEQSFREIKVP
LDLVTERLAAFTDPGNCTTHVEHILRDFSSHEEQTCEVLDQAKDLASEGDQLIQNNHYAV
DSILPKCNELRRVTEDLASEMQLRKAFLHKCLELHQSLEKAAQWCDEGIYLLASQPVDKC
QSQDGAQSALQEIERFLEAAADNKLQDLDTITSDYESILNQEFSEHVQKVLQKQEGMQEM
FEKRRVSLKKLAAKQTRPVQPVAPRPEAFSKSPHSSPGLRRGSENTFSPDKDALRRLNYQ
KGGCKESRTESISEEEESLAVLRRHVMNELIETERAYVEELLCVLEGYAAEMDNPVMMHL
IPAALQNKKEILFGNMTEIYQFHNRIFLRELESYIHYPELVGRCFLERMKDLQIYEKYCH
NKPRSESLWRQCSDCVFFQECQKKLEHKLGLDSYLLKPVQRITKYQLLLKELLKYSKNCD
GSEDLQEALTAILGILKAVNDSMHLIAITGYDGNLNDLGKLLMQGSFNVWTEHKKGHSKV
KDLARFKPMQRHLFLHQKALLFCKRREENGEGYEKAPSYSFKHYLNMSAVGITENAKGDY
KKFEIWCNAREEVYIVQAPTPEIKTAWVNEIRKVLTGQLNAYREASQQKSSEQVFQSPGA
GIPVSSSSPFKSYQKNNKKSDEKKSEPASPDSCFGSATSPKYPERDEATTSPTSERSAVS
KRFTLQGFSNLKNQKESPPPTVKSRTLPIALLSRPGSPTSPDTKAKRHEIKSDPTPFGFR
VWGKASQSLDASEENDGYSSAEDPLNSSDTEEEAAGKKLSPGKYTVVAEYDKGNAGDLTV
KSGEMVQLIREGEDGQWYVKNLNTNKEGWVSAANLLAMIGDSKSSLSLCSSESGTVSSNL
STSSSCSESCTASNTSISDIKG
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcacggactgttaaaggatgggcaagaaactcattacagcatctttacccaa
ctcagccaattcattcagagtctttctgctactgttctgggctcgctgcctaggggaaac
tggaaaacaagctctcggccagaatggtctgatgaaatcatgcagcaagagaccagtcca
ttgtgtgctgtggatattaaagaggttataaagaagcagtttgcttacctatcaggaggt
agaggagaagatggctgccccatcatcacttttcctgaatatccatccttcagtgagatc
caagagagagaaattcatgatgtcctcacctacctcaccagcattcccagcttacaagct
gctggggttggatttatcctcatcatagatcgaagacaagacaaatggacctctgtgaaa
ggcaccctgctgagcatagcggggtccttcccagggattctgcagctcatcctggtgctt
cgtcccactgggctgttccagcgagctctctctgacatcgtcttcagattcaacaaagat
gagtttaagatgaaggtaccgatcatcatgttgagctcagtaacagaattacacacttac
atcgatagaacccagctaacccaggagcttggcggtactctggcatattgccatgatgag
tggctttctcgtcggacggcgattgaaggttttgccctaatggtaaaaaagacggctcaa
atgcttcagtcttttgggactgaacttgcggaaactgaactgccaaatgatgtgcaggca
acctcgagccttcttgaggtacatacagaaaagaaagagaagatgaaggaagatttgagg
caagccctaaaccaaggacatggacttcttgaaagcattaatgagccagtcacgaaggat
ccaggttacatactgaaccaggatgagctggagaatctggccactgtggaaaggctgctc
ggtcagttaaatgagactgaaaccgcgtttgatgaattctgggataagcatcaaagcaag
cttgagcagtgcctgcagctccgccattttgagcagagtttccgggagatcaaggtgcca
ttagatcttgtaactgagcgcctggctgcattcacagacccaggaaactgcaccacacac
gtggagcacattctgcgagactttagtagtcatgaagagcaaacctgtgaggtattggac
caggcgaaggacctggcatcggaaggggatcagctgatccagaacaatcattatgctgtg
gactccattctccccaaatgcaacgagctgagacgtgtgactgaggatctcgcctcggag
atgcagctgaggaaggcttttctccacaagtgtttggagttgcaccagagtcttgaaaag
gctgcccagtggtgtgatgaagggatctacctgctggcttcacagccggtggacaagtgc
cagtctcaggatggagcccagtcagccctgcaggagattgagaggttcttggaggctgcc
gctgacaacaagctccaagaccttgatacaatcaccagcgactatgaatcgatacttaac
caggagttcagcgaacatgtgcagaaggtgctccagaagcaggaggggatgcaggaaatg
tttgagaagcggcgtgtgagcctgaagaagctggccgccaagcagacccgacctgttcaa
ccggtggcacccaggcctgaggctttcagtaaatctcctcactcatccccagggctccgc
agaggctctgaaaacacattctccccagacaaagacgccttgcgcaggctaaactaccaa
aaagggggatgtaaggaaagcaggactgagtctatatctgaggaagaggaaagcctagca
gtactgcgaagacatgtgatgaacgagctgattgaaaccgagagggcctatgtggaagag
ttgctgtgtgtacttgagggatatgcagcagagatggataaccctgtgatgatgcatctt
ataccagcggcactgcagaataagaaggagattctctttggtaatatgacagaaatctac
caattccataataggatatttctaagggagcttgaaagttacatccactatccagaactt
gtaggaaggtgttttcttgaaaggatgaaagatttacagatttatgagaagtactgccac
aataaacccaggtcagaaagcttgtggaggcagtgctcagactgtgtcttctttcaggaa
tgccagaagaagctagaacataaattaggtttggactcgtatttattaaaacccgtacag
aggataacgaaatatcagttattattaaaggagttgttgaagtacagcaaaaactgtgac
gggtctgaggatctgcaggaggccctcaccgcaatactggggatcctgaaagccgtcaac
gactccatgcacctgatcgccattactggatatgacggaaacttgaatgatcttggcaag
ctgttaatgcaaggatcctttaacgtgtggacggagcataaaaagggacactcgaaggtg
aaggacctggcccgtttcaagcccatgcagaggcacctctttctgcatcagaaagccctg
ctgttctgcaagaggagagaagagaacggggaaggatacgagaaggcaccttcctacagc
ttcaaacattatttaaatatgagtgctgttggaatcacagagaacgcaaagggagattat
aaaaagtttgaaatctggtgtaatgcaagggaggaagtttacattgtacaggctccaaca
ccagaaataaaaacagcatgggtaaatgaaatcaggaaggtgctaactggccaactgaat
gcatatcgcgaagcaagccaacagaagtcttcagaacaggtgtttcagtctcctggagct
ggtatacctgttagttcaagtagtccttttaagagttatcaaaaaaataacaagaaatcg
gatgagaaaaagagtgaaccagccagcccagatagctgctttggttctgctacttcccca
aagtacccagaaagagatgaagccacaactagccctacctcagagcgctctgcagtgtct
aaacgttttactttgcagggcttcagtaaccttaagaatcagaaagaatctccacctccc
acagttaaaagtcgaacgttaccaatcgcacttctttcaagaccaggatctcctactagc
cctgacactaaagcaaaacggcacgagatcaagagcgatccaacgccgtttggctttaga
gtttggggtaaagcatcccaatcgctcgatgcatctgaagaaaatgacgggtattccagc
gcagaagatccactcaattcctcggacacagaggaggaggcggcaggtaaaaagctgagt
cctggtaaatatacagtagtagccgagtacgacaaaggaaacgcaggtgacctgacagtg
aaaagcggagaaatggtccagctgattcgggaaggagaagatgggcaatggtatgttaag
aacctcaataccaacaaagaggggtgggtttctgctgcaaacctgctggcaatgataggg
gactccaaatcttcgctttctttgtgtagctcagaatctggcactgtttctagtaacctg
agcacatcctccagctgcagtgagagttgcacagccagtaacaccagcatctctgatatc
aagggctaa
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integrated database retrieval system
