Polyodon spathula (Mississippi paddlefish): 121320875
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Entry
121320875 CDS
T07273
Name
(RefSeq) lysosome-associated membrane glycoprotein 1-like
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa03273
Virion - Lassa virus and SFTS virus
pspa04140
Autophagy - animal
pspa04142
Lysosome
pspa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121320875
03272 Virion - Hepatitis viruses
121320875
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121320875
04142 Lysosome
121320875
04140 Autophagy - animal
121320875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320875
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121320875
04090 CD molecules [BR:
pspa04090
]
121320875
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121320875
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
121320875
Other autophagy associated proteins
RNautophagy/DNautophagy
121320875
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
121320875
CD molecules [BR:
pspa04090
]
Proteins
121320875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Transglut_N
Motif
Other DBs
NCBI-GeneID:
121320875
NCBI-ProteinID:
XP_041115554
LinkDB
All DBs
Position
9:41496521..41514860
Genome browser
AA seq
407 aa
AA seq
DB search
MALLHSNKQLLFAGVALISFLGCLTPVFAVAFEVKNGNNTCIMAELSANISVKYTVADKQ
MNTVLVALPDSATVGNSSTCGNVTVAPLLVVRFGDGHSLSLNFSRNASDYQVDTLSVTLN
MSDSAVFVNSSAKAPVTVSSSSTGIQASLNTTYRCMSETQVTLTNVNVTFSNMRVEAYLP
AANFSKEATVCNADISTSTPAPKTTATTTTPAPTTALTNPTAGTYNVTKSNETCLLAKMA
LQLNITYQNKITVFNINPVTTVASGVCDTNVSVLFLRDGSTNLTFMFKLSDSKKFYLSEI
AVATSDGFKGENESLTYLRGTLGRSYMCSAEQTLTVTPVFSVNTFHLQVQPFGVSSGKFG
TAEECQLDEDNMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctctcctgcactcaaataaacaacttctgtttgccggagtcgcgcttatttcattt
ctaggttgccttacccctgtgtttgccgtggcatttgaagtgaagaatggaaacaatacc
tgtataatggctgagctatcggccaacatctctgtcaagtacacagtagccgacaagcaa
atgaacacagtcttggttgcccttcctgacagtgccacagtaggtaacagcagtacatgt
ggcaatgtcacagtagcccccttgctggtggtccgctttggagatggccactccctcagc
ctgaacttctcaagaaatgcgtcagattaccaagtggacaccctctcggtcacactgaac
atgagtgacagtgcagtctttgtcaattcaagtgctaaagcaccagtgaccgtgtcctcg
tcttctactggaatccaagcatcattgaacacaacttacagatgtatgagtgagacccag
gtgaccctgaccaatgttaatgtcacattcagtaatatgagggtggaggcttacctgcca
gctgctaacttcagcaaagaagccactgtttgcaatgcggatatcagcactagcacccca
gctccaaaaaccacggcaaccaccaccaccccagcaccaaccacggccctgacaaacccc
actgcaggaacatacaatgtaaccaaatccaacgagacgtgcctgcttgctaaaatggct
ctgcagcttaacatcacctaccagaacaaaattactgtcttcaacatcaatcctgtaacg
actgtagccagtggggtctgtgatactaatgtttcagtgctgtttctgagggatggcagc
accaatctgactttcatgttcaagcttagtgacagtaagaaattctacttgagtgaaatt
gctgttgccacgtctgatggattcaaaggtgaaaatgaaagtctgacatacctaagaggc
actcttggcagatcttacatgtgcagcgctgaacaaaccctgactgtcacccctgtgttt
tctgtcaatacatttcacctgcaagttcaaccttttggtgtcagcagtggcaagtttgga
acagcggaggagtgtcaactggatgaggacaatatgctgattcctataatagtgggtgca
gccctggctggactggtcctgatagttctgattgcttacctcattggcagaaagagaagt
catgctggatatcaaaccatctaa
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