Polyodon spathula (Mississippi paddlefish): 121320893
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Entry
121320893 CDS
T07273
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121320893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121320893
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121320893
Pre-60S particles
121320893
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Importin_rep_6
Importin_rep_4
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
Cnd1
HEAT_EF3_N
Importin_rep_5
IBN_N
TPR_TNPO3_IPO13_3rd
Cnd3
Adaptin_N
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
121320893
NCBI-ProteinID:
XP_041115589
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Position
9:complement(41950927..41968812)
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AA seq
1093 aa
AA seq
DB search
MAEQQQFYLLLGNLMSPDNNTRKQSEETYESIPGPSKITFLLQAVRDATAAEEARQMAAV
LLRRLLSSAFDEVYPTLPEDMQNAVKTELLMGIQMEASPGIRKKVCDIAAELARNLLDDD
GNNQWPEVLKFLFDSVSSQDVGLRESALHIFWNFPGIFGNQQQHYLEVIKRMLVQCMQDQ
EHPPIRTLAARAAASFVLANESNTPLLKYFADLLPGVLQAVNESCYQNDDSVLKSLVEIA
DTAPKYLRPNLEATLQLSLKLCADTSLSNMQRQLALEVIVTLSETGSAMLRKHTNLVEQS
IPQMLAMMVDLEEDEEWAMADELEDDDFDSNAVAGESALDRVACGLGGKIVLPMIKAHIM
QMLQNPDWKYRHAGLMALSAIGEGCHQQMEAILVEIVNFVLLFCQDPHPRVRYAACNAVG
QMATDFAPTFQKKFHDRVIASLLQTMEDQANPRVQAHAAAALINFTEDCPKSLLIPYLDS
LVKNLHVIMVAKLQELIQKGTKLVLEQVVTSIASVADTAEEKFVPYYDLFMPSLKHIVEN
AVQKELRLLRGKTIECISLIGLAVGKDKFMPDASEVMQLLLKTQTDFNDLEDDDPQISYM
ISAWARMCKILGKEFQQYLPVVMGPLMKTASIKPEVALLDTQDMENMSEDDGWEFVNLGD
QQSFGIKTAGLEEKATACQMLVCYAKELKEGFVEYTEQVVKLMVPLLKFYFHDGVRVAAA
ESMPLLLECARARGPEYLTQMWHFMCDALIKAIGTEPDSDVLSEIMHSFAKCIELMGDGC
INNEHFEELGGILKGKLEEHFKNQELRQAKRQDEDYDEQVEESLQDEDDNDVYILTKVSD
ILHSVFSSYKEKVLPWFEQLLQLIVNLICPHRPWPDRQWGLCIFDDVVEHCSPASFKYAE
YFIRPVMQSLCDSSPEVRQAAAYGIGVMAQFGGENYIPFCTEAIPLLVGVIQAADSKAKE
NVNATENCISAVGKVMKYRPECVNVGEVLPHWLSWLPLNEDKEEAVHTFNFLCDLLENNN
PIVLGPDNSNLPKLFSIIADGVISECVKHEDGCSRRLANVVRQVQVSGGLWTGCISMLNE
AQQKAIKDLLNTA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaacagcagttctatctcttgctgggcaaccttatgagccctgacaacaac
accaggaagcagtctgaggaaacctatgagagcatccctggcccgtccaagatcacgttc
ctgcttcaagcagtgagggatgcaactgctgctgaggaggccaggcagatggccgcagtc
ctgctacggcgactgctgtcttctgcctttgacgaggtttatcccacgcttccggaggac
atgcaaaacgccgtcaagactgaactcttaatgggcatccagatggaggcatcgccagga
attaggaagaaggtctgtgacatcgctgctgaactggcacggaacctgcttgatgatgat
ggaaacaaccagtggccagaagttttgaaattcctgtttgattcagtcagctctcaggac
gtgggattacgggagtctgccttgcatattttctggaatttccctggaatctttggaaat
cagcagcagcattacctggaggttattaaacgtatgctggttcagtgcatgcaggatcaa
gaacacccaccgatccggactctggctgcaagggcagcagcttcctttgttctagccaat
gaaagcaacacacccctcttaaagtactttgctgacttgctacccggtgtcctgcaggct
gtaaatgagtcctgttaccaaaacgatgactctgtgctgaagtcgttggtggagattgct
gacactgcccccaagtatctgcggcccaacttggaggccactttacagctcagtctcaag
ctgtgcgcagacaccagtttgagtaacatgcagcgccagctggccctggaagtcattgtc
actctctctgagactggctctgccatgctgagaaagcacacgaaccttgtggaacagagt
attccccagatgttggcaatgatggtggatttggaggaagatgaagagtgggccatggct
gatgaacttgaagatgatgattttgacagcaatgcagtggctggggagagtgcactggac
agagtagcttgtggactgggggggaagattgtacttcctatgatcaaagcacacatcatg
cagatgctgcagaatcctgattggaagtacaggcatgctggactaatggcgctctcggcc
atcggtgaaggctgccaccagcagatggaggccatcctcgtggaaatagtcaacttcgta
ttgctgttctgccaagatcctcatccaagagtgagatatgcagcttgcaatgcagttgga
caaatggccacagactttgccccaaccttccaaaagaaattccacgatagggtgatcgct
tccctgttgcagaccatggaagaccaggccaatcctcgggttcaggcacacgcagcagct
gctcttataaacttcactgaagattgtcccaaatctctgctcattccatacctggacagc
ctcgttaaaaacctgcatgtcatcatggtggcgaaactgcaggagctgatccagaagggt
accaagctggtgctggagcaggtggtgacctccatcgcctcagtggcagacaccgcggag
gagaagtttgtcccctattatgacctcttcatgccgtccctgaagcacattgtagagaac
gctgtgcagaaggagctccggcttctccgtggaaaaaccatcgagtgcatcagcctcata
ggcctcgctgtcgggaaagataagttcatgccagatgcctccgaggtgatgcagctcctg
ttgaagacacagactgatttcaatgacctggaggatgatgacccacagatatcttacatg
atttcagcctgggccagaatgtgcaagatccttggcaaagaattccagcagtacctccct
gttgtgatggggccgctcatgaaaaccgcttccattaaaccagaggtggcccttttagac
acccaagacatggagaacatgagtgaggatgatggatgggagtttgtgaacttgggagac
cagcaaagctttggaatcaagaccgcagggctggaggagaaagcaactgcatgccaaatg
ctggtatgttatgccaaagaactgaaggaaggatttgtggaatacactgagcaagttgtg
aagctgatggtccctttgctaaagttttatttccatgatggtgtccgtgtggcagcagca
gagtccatgcccctgctgctggaatgtgcgagagcgcgtggccccgagtacctgactcag
atgtggcatttcatgtgcgacgccctcatcaaggcaattggaaccgaaccggattcggac
gtcctgtctgaaatcatgcactcttttgcaaagtgcattgagttaatgggagatggctgc
attaacaatgaacacttcgaagagcttggtggaatcctgaaagggaaactggaggagcac
tttaaaaatcaagagttaagacaagccaaaaggcaagatgaagattatgatgaacaagtt
gaagaaagtttacaggatgaggatgataatgatgtgtacatattgacaaaagtctcagac
attctgcattctgtattcagcagctacaaagagaaggtgctgccctggtttgaacagctg
ttacagttaatagtcaatcttatttgcccacacaggccttggccagacagacagtggggg
ctttgcatattcgatgatgttgttgagcactgcagcccagcatcctttaaatatgcggag
tacttcattcgacctgtgatgcagtcactatgtgacagcagcccagaggtgagacaagct
gcagcctatggaattggtgtcatggcacagtttggaggagaaaattacatacccttttgt
acagaggccattccactgctggtaggagtgatccaggctgcagattccaaagccaaagaa
aatgtgaacgcaacagagaactgcatctcggcagtggggaaggtaatgaagtacaggcct
gagtgtgtgaacgtcggcgaggtccttcctcactggctgtcatggctgccgttgaatgaa
gacaaggaggaagctgttcacaccttcaatttcttgtgcgaccttcttgaaaacaacaac
cctattgtccttggacccgacaattccaacttgcccaaacttttctcaataatcgctgat
ggtgttatcagtgaatgtgttaagcatgaagatggatgtagcagacggttggcaaatgtt
gttcgtcaagtacaggtctctggaggtctctggacaggatgcatatcaatgctgaatgaa
gcacaacagaaagctataaaggacctgctgaacactgcttga
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