Polyodon spathula (Mississippi paddlefish): 121320909
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Entry
121320909 CDS
T07273
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121320909
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121320909
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121320909
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Others
121320909
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Ortholog
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GFIT
Motif
Pfam:
Glypican
DUF4266
Serglycin
DUF5856
Motif
Other DBs
NCBI-GeneID:
121320909
NCBI-ProteinID:
XP_041115621
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Position
9:complement(42550161..42772788)
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AA seq
551 aa
AA seq
DB search
MLWIGSVFCTFSVLSLSIGADLKPRSCSEVRQAYTAKGFSLVNVPHQEISGEHLRICAQG
YTCCTSEMEDKLSQQSKLEFENLVEEASHSMRTTFVSRHKKFDEFFRELLENTKKSLNDM
FVRTYGHLYMQNSEVFQDLFAELKRYYTGGNVNLEEMLNDFWARLLERMFQLVNTQYHFT
EDYLECISKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQGLTVGREVANRVSKVNPTPG
CIRALMKMLYCPHCRGIPALKPCNNYCLNVMKGCLANQADLDPEWNLFIDAMLLVAERLE
GPFNIEAVMEPIDVKISEAIMNMQENSMQVSSKVFQGCGQPKPAPPGRSTRAASDIFNHR
FKPSEERPTTAAGTSLDRLVVDIKEKLKKSKKFWSTLPDSICSDVKVTGDRSNEEECWNG
HTKGRYLPEIMNNGLTNQINNPEVEVDITRPDTFIRQQIMALRVMTNKLRNAYNGNDVNF
QDASDEGSGSGSGSGCTEMCIPEFEVISTKAPTVVVDRFAETKASAPKPSHSLVLTVFLL
CTLFALQRSLR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggatcgggtctgttttttgcactttctccgtgctgtccctttcaattggagct
gatctcaaaccacgaagctgcagcgaggtcaggcaggcgtacactgctaaaggcttcagt
ctggtcaatgttcctcaccaggaaatatcaggagaacatctgcgaatatgtgcccaggga
tacacatgctgtacctcagaaatggaagacaaactcagccagcagagtaaactggagttt
gaaaacctggttgaagaagcaagtcactccatgcgtacaacctttgtgtccagacataag
aagtttgatgaattcttccgggagctcctggaaaacaccaagaagtccttaaatgacatg
tttgtgcgtacgtacggccacttgtacatgcagaactccgaggtgtttcaggacctgttt
gcagagctcaagaggtactacacgggtggcaacgttaatttggaggagatgctgaacgat
ttctgggctcggctgcttgaacggatgtttcagctggtgaacacacagtaccactttaca
gaggactacttggagtgcattagcaagtacacagaccagctgaagcctttcggagatgtc
ccaagaaaactgaaggttcaggttactagagcattcattgctgctcgcacctttgtccag
ggtctcactgttggcagagaggtggccaacagagtgtccaaggtcaacccaactcctggg
tgcatccgggcactaatgaagatgttatactgtcctcattgtcgcggaattcctgcccta
aagccctgcaacaactactgcctgaatgtaatgaagggatgcctggcgaaccaagccgat
cttgatccggaatggaatctcttcatagatgccatgttgttggtggcagagaggctggag
ggaccttttaacatcgaggcagtgatggagcccatcgatgttaagatttctgaagccatc
atgaatatgcaggaaaacagcatgcaagtgtcatcaaaggtgtttcaaggttgtgggcag
ccaaaaccagctccccctggaagatccactcgtgctgcttcagacattttcaaccaccgc
ttcaagccatccgaagaaaggcccaccacagcagctggcacaagcctcgacagactggtt
gttgatattaaagaaaaactgaagaagtctaaaaagttctggtccacattacctgacagc
atctgtagtgatgtcaaagtgacaggtgacagatctaatgaagaggaatgctggaacggg
cacacgaagggcaggtacttgcctgaaatcatgaacaatggccttacaaaccagattaat
aaccccgaagttgaagttgacatcacaagaccagacactttcattcgtcagcagatcatg
gcactcagagtaatgacaaacaagctgagaaatgcatataatggaaacgatgtcaatttt
caagatgcaagtgatgaaggcagtgggtcaggaagtggcagtggatgcactgagatgtgc
atccctgaatttgaagttatcagcacaaaagcccccactgtcgtcgtggacagatttgct
gaaacgaaggcttcagcccccaagccgagccactccctggtgctcactgtgttccttctc
tgcacgctcttcgcactgcagagatcattgagataa
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