Polyodon spathula (Mississippi paddlefish): 121320913
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Entry
121320913 CDS
T07273
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121320913
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121320913
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
BAR_4
ApoC-I
Motif
Other DBs
NCBI-GeneID:
121320913
NCBI-ProteinID:
XP_041115626
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Position
9:1255497..1279655
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AA seq
952 aa
AA seq
DB search
MAQLYYKRTDNSSYRDRIPLRIVRAESELSPSEKAYLSAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIGIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSVPQPHEVHCNCVV
CVSSTDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSHQCKEFAKDLLDQTRSSRELEIILNYRDDSSLLEEENSNDLARLKLAIRYHQKEF
VAQPNCQQLLSSRWYDEFPGWRRLHWAGKFITCIFIGLMFPVFCVCYLIVPKSPFGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTDPKRQGPPPTIVEWMILPWVLGFIWAEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAYFKYSGSRPREEWDMWHPTLVAEAV
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFMFIYCLVLLAFANGLNQLYFY
YETNEPDTCKGIRCEKQNNAFSTLFETLQSLFWSIFGLISLHVTNVNARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHSDIEWKFARTKLWMSYFEEGGTLPTPFNIL
PSPKSVWYLFKWIKRQLCKNKKTKKPESLGSLGRRAAKNLRKNHHYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRYEVLGLLKGSKTGIKLGTGASNLANVGGFCKYD
AASSGTTQKSKLHLFDVTSLLQQRPKSNASEGYNGLINGSALLVSDKGKQQKRDIPKHLS
NFGLFQRRQKINSVNQSTNKIYSVSEEAGEYELDETTCDTKDIDIAGIETSNELESDSRT
PINQLNTEDFLHEQSSDSIPCASSLETGEDSLATEVGKGNGSAVKGECDTRL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactttattataaaagaaccgacaactcttcatacagagaccgcattccactt
cggatagtgcgagccgaatctgagctgtcgccttcagagaaagcctatttaagcgctgtg
gagaaaggggactatgccagtgttaagcaagcactggaggaagccgaaatttatttcaaa
atcaatattaactgcatcgaccctcttgggagaacagctcttcttattggcattgaaaat
gagaaccttgaaatcattgaactcctcttaagttttaatgtgtatgttggggatgctctt
cttcatgccatcaggaaggaggtcgttggggctgtggagctgctgctgaatcacaaaaaa
cccagtggagaaaagcaggtgccacccatattgctggataagcagttttcggatttcaca
cccgacatcacaccaatcattctggctgctcacaccaataactatgagattataaagctt
ctggtccagaaaggggtttccgtaccccagccacatgaagtgcactgtaactgtgtggta
tgtgtctccagcacagatgtggacagcttgcgacactccagatccaggttgaacatctac
aaggctttgtcaagcccatctttgatagccctgtccagcgaagatccctttcttacggcc
ttccagttgagttgggagctacaggagttaagcaaagtggagaatgagttcaaatcagag
tatgaggaactatcgcatcagtgcaaagagtttgcaaaggaccttttggatcagaccaga
agctccagagaattagaaatcattcttaattaccgggatgatagcagtctgctagaagag
gagaacagcaacgatctagcaagactgaagctggcaattaggtaccatcagaaagagttt
gttgctcagccaaactgtcaacagttgctttcctcacgctggtatgacgagtttcccgga
tggagaagactccattgggcagggaagttcataacatgcatatttataggacttatgttt
ccagtattctgtgtatgttacctaattgtcccaaaaagcccgtttggcctgttcatcaga
aagcccttcataaagtttatttgccacactgcatcctacttgactttcctgtttctgctg
cttctggcatcacagcatatcgtcacaactgatccaaaaagacaaggacctccaccaacc
attgtggagtggatgattctgccttgggttttaggttttatatgggctgaaataaaacag
atgtgggatggtggacttcaagattacattcatgactggtggaatctgatggattttgta
atgaattctttgtacctagcaacaatttctcttaaaattgttgcctattttaagtacagt
gggtcaaggccacgagaggaatgggacatgtggcatcctacacttgtggctgaagcggtt
tttgccattgcaaacatcttcagctctttgcgtttgatctcactctttactgcaaactcc
cacctcgggcctctgcagatatctcttggaaggatgttactggacattctgaagtttatg
ttcatctactgcctggtactgttagcatttgcaaatggattaaatcagctatacttttat
tacgagactaatgagcctgatacatgcaaagggatacggtgtgaaaagcaaaataacgca
ttctccacgttatttgagactctgcagtctttattctggtccatatttggactgatcagt
ctgcatgtgacaaatgtcaatgctcgacatgaatttacagaatttgtgggggccacaatg
tttggaacgtacaatgtcatctctcttgtggtcttattaaacatgttaatagccatgatg
aacaactcctaccaacttattgctgaccattcagacattgagtggaagtttgcaagaaca
aagctttggatgagctattttgaagaaggtggtactcttcctactcccttcaatatcttg
ccaagtcctaaatcagtttggtacttgttcaaatggattaagagacaattgtgcaaaaac
aaaaaaacaaaaaagccagaaagccttggatcattagggagacgtgcagctaaaaatctg
agaaaaaatcaccactaccaggaggttatgagaaacttagttaaaagatatgttgcagct
atgatcagagatgcaaagacggaagaaggactgacggaggaaaatttcaaggagttgaaa
caagacatatcaagtttccgatatgaagttcttgggttactaaaaggaagtaagacaggg
atcaaacttggcacaggggcatctaatctggctaatgttgggggattttgtaaatacgat
gctgcaagcagtggaacaactcagaagagcaagctccacctttttgacgtgacttccttg
cttcaacaaaggcctaaatccaatgcttctgaagggtataatggcttaatcaatggatct
gcacttttagtctccgacaaaggaaaacaacaaaaaagggatattcctaaacacctgtca
aactttggattattccaaaggcggcaaaaaataaacagtgtaaaccagagcacaaataaa
atctactctgtttctgaggaggcaggtgaatatgagctggatgaaacaacttgtgacacc
aaggacattgatattgctggaatagaaactagcaatgaattagaaagcgattcaaggaca
cctattaatcaattgaacactgaggactttttgcatgaacaatcttctgacagtattcct
tgtgcatcttctttggaaacaggagaggacagcctcgccactgaagttggaaaaggtaat
ggctctgcagtaaagggggaatgtgacacaagattgtga
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