Polyodon spathula (Mississippi paddlefish): 121320918
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Entry
121320918 CDS
T07273
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121320918
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GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
LRR_14
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
121320918
NCBI-ProteinID:
XP_041115631
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Position
9:43947557..43950742
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AA seq
694 aa
AA seq
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MLPWILLLKATLCVAIGNVTRDVCKEGICSCDEIEGDLHIDCEKRGFSNLQHLTGPSSQF
YHLLLHGNSLTRLFPNEFANFYNAVSLHLENNGLHEIVPGAFLGLQLVKRLHINNNKIRS
FRRSTFLGLDDLEYLQGDFNLLRDIDPAVFRDLNKLEVLILNDNLISALPTDVFQHVPIT
HLDLRGNRIKTLPYEGVLEQIPGIAEILLEDNPWDCNCDLVSLKEWLENIPRNALIGRVL
CEAPTRLQGHDLNETSEHELCPLKNGIDSSLIAPPTEEETTDPRPIPTPFKINGVTVTPT
TASGNKGRPKSRGNWQLKTRPTVRMATVNGKNMQLYNEQCPLTCSCELVDSEQGLKVNCK
ERQLESLADLKPKPINVQELNLRDNNVHTIKKSHFLDYKNLHLLDLGNNVIKVIENSTFQ
NLIELRWLYIDKNYLDTLIAEMFTGLLNLEYLNLEYNSIQCIMPGTFKSMPKLRVLILNN
NILKSLPSDVFTGVTLSKISLNNNYFTFLPVIGVLDQLLSIIQIDLHGNPWDCSCNIVPF
KQWTERLGSDVIVSDLKCESPEKFWTKDFRFLRNDLICPHLYEKIFPTSLSKNSTAALDT
GTRSNSYPETSRVSISVLVPGLILVFVTSAFTVVGMLVFILRNRKRSKRRDTNSSASEIN
SLQTVCDSSYWHSGAYNADGPHRVYECGTHSLSD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgctgccttggattttgttgttgaaggcgactctttgtgttgctattggaaatgttaca
agggacgtttgtaaagaggggatctgttcatgcgatgagatagaaggcgatttgcacatt
gactgcgaaaaaaggggtttttctaatctgcagcatttaactggcccaagttcacagttc
tatcatttattgttacacggaaattccctgactaggttgttccccaatgagtttgctaac
ttttacaatgctgtcagtttacatctggaaaacaacggtttacacgaaattgttccaggt
gcttttcttggactgcagttagttaaacgattgcatataaataacaataagatcagatcc
ttcaggaggagcacgtttttgggcttggatgacctggaatacctacaaggtgattttaat
ttgttaagggatattgacccagcagtatttagggacctaaataaactggaggttctgatt
ttgaatgacaacctgatcagcgcacttcccaccgatgtgtttcagcatgtaccaataacc
cacctcgacctgcgaggaaacagaattaaaactttgccttatgagggagtcctggagcaa
ataccaggaattgctgaaattcttttggaggataacccatgggactgcaattgtgatctt
gtgtctctgaaagaatggcttgaaaatatccctagaaatgctttgatcgggagggtactg
tgtgaggccccaacgcgattgcaaggacatgatttaaatgaaacatcagagcatgagctg
tgccccttaaaaaacggaattgactccagtttgattgcgcctcccacagaagaagagacc
actgaccctagacctattccaacccccttcaaaataaatggagtaacggtgactccaact
acagcgtctggaaataaggggcgtccaaaatcacgtggaaactggcagctgaaaaccaga
cctacagtaagaatggcaacagtcaatggaaagaatatgcagttatataatgaacaatgc
ccacttacatgtagctgtgaactggttgattctgaacagggactgaaagttaattgtaag
gaaagacaattagaaagtttagctgatttaaagccgaagcctataaacgtccaagagctg
aatcttagggacaacaacgtacacactatcaaaaaatcccacttcctagattataaaaac
cttcatcttcttgatttggggaacaacgtcattaaggttatagaaaacagtacttttcaa
aatctcattgagctaagatggctttacatagataaaaactacctggatacccttattgcc
gaaatgtttacaggattgctaaatctggaatatctcaatttggaatataactctatacag
tgtataatgcctggcacattcaagtcaatgccaaagctaagagttttaattctaaacaat
aatattttaaaatctttgccctcggatgtgtttactggtgttactttatcaaaaatcagc
ttaaataacaattattttacatttcttcctgtaattggtgttttagaccagcttctatcc
attatacaaattgatctgcatgggaatccgtgggattgttcgtgtaatattgtgcctttc
aaacaatggactgaaaggctcggatcagatgttattgtgagtgacttgaaatgcgaatcc
ccagaaaagttctggacaaaggatttcagattcctaagaaatgatcttatatgcccgcat
ctttatgaaaaaatctttcccacgtctttgtctaaaaacagcaccgctgccttggatacg
gggactcgctctaattcgtaccccgaaacaagcagggtatctatatctgtactggttcct
gggctgatccttgtttttgtcacttctgcatttacagttgtgggaatgctggtctttatt
cttcgaaatcgcaaaagatcaaaaagaagagatacaaactcttctgcgtctgagataaat
tccttacagacagtatgcgactcttcatactggcatagtggggcttataatgcagatgga
ccccacagagtttacgaatgtggcacccactcactttcagattag
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