Polyodon spathula (Mississippi paddlefish): 121320939
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Entry
121320939 CDS
T07273
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121320939
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121320939
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
121320939
NCBI-ProteinID:
XP_041115693
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Position
9:complement(7319085..7324770)
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AA seq
701 aa
AA seq
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MGKNKRPPAGQHKHCEKCFSCRCRAPIEISISCMVINCRLHCGAVFHMCKEEEHKLLCLQ
EKVPCLNAEYGCPFSMLRFKLAKHLEVCPASTVSCSMEWNRWPLIETDTILNENVMKEPY
SEENLDLSMALRDQKALFNSLKMRSLFPELTEQVPEVRDGASELGAEGAELEAGCSGQAT
ASGSNIFIDSVGRVFSGEEVIELTQAEREALAKNTNVADFERYDIWENMFSKEKSSCKHT
EKALKKQSHTGHKDQAASSSKKQQVEPQNDTNGEAEAERYLDKTGQAPWQDGVLERLSKQ
VTPMEYNMYLVHNGSMLINFGQIDACTPRDREFVYESIEPMELKSVQTFKVPKSYRAKRS
YGGMSSMKKEHKAVDTSDLGVTEDEIPTWDEIRASLLCSLERELKGHVISETKGSDGVTI
DFGTQTYSFESTPFKPDCSLADITADRSPFLSFHLQPESVTNRHNKVSSVFTLFCHHFFR
RDEFPSHFKNIHADMQSSLSGWFEQRCPLSYLGCTYSQRKFRPARQKAKVTYSQELSTFI
LKPEVSSLLFEGVKTNPALRKHASNLDSLSSLPLEMLQHIAGFLDSLALSQLAQVSQYMR
EVCSTLLQERGMVSLKWEKKTYSHGGSSWRARKKVWQFSCLFSTVDSWCFDDIPSMSEHL
KVCPFYVTEQRSEPVPLASMCGTKEQLQERSTLVSMFLPQP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaacaaaagacccccggctggccaacacaagcactgtgaaaagtgcttcagc
tgtcgatgcagggccccaatagaaatatccatctcctgcatggtgataaactgtcggctt
cactgtggggcggttttccatatgtgcaaggaggaagagcacaaactgctgtgcctgcag
gaaaaggtcccctgccttaatgctgaatatggctgcccattctccatgctccgtttcaaa
ctcgctaagcatctggaggtctgtccagcaagcactgtgagctgctccatggaatggaac
cgctggcctctaatagaaacagacaccattctcaacgagaatgtaatgaaagaaccatat
tctgaggagaatttagacctgtctatggctctcagagaccaaaaagccctattcaattct
ttaaaaatgagatccctctttcctgagttgacagaacaagtccctgaagttagagatgga
gcttcagaactaggagcagaaggggcagaactagaagctggatgctctggtcaagccact
gcttcaggaagcaatatctttatagattctgtggggagggtatttagtggggaagaagtt
attgaactgacccaagctgagcgtgaagctttggcaaagaatacaaatgtggcagacttt
gaaaggtatgacatctgggagaacatgtttagtaaggagaagagcagctgcaaacacact
gaaaaggctttaaagaaacaaagtcacacagggcacaaagatcaggctgcatccagcagt
aaaaaacagcaggtagagcctcagaatgatacaaacggggaggctgaagctgaaagatat
cttgataagacgggtcaagcaccttggcaggatggggttctggaaaggctaagcaaacag
gtcaccccaatggaatacaacatgtatctggtgcacaatggcagcatgctgattaacttt
ggccagattgatgcctgtaccccaagagacagggaatttgtttacgaaagcatagaacca
atggaactcaaaagtgtccaaacatttaaggttcccaaaagttaccgtgccaaaaggtca
tacggtgggatgtcttcaatgaagaaagaacacaaggccgttgacacatctgatttaggt
gtcaccgaagatgaaataccgacatgggatgagattagggcttccttactttgttcatta
gaaagagaattaaaaggtcatgtcatctcagagaccaagggaagtgacggggtgactata
gactttggaacacagacttattcatttgaatcaacaccgtttaagccagattgttcattg
gctgacattacagcagaccggagtccgttcctcagttttcatcttcaacctgaaagcgtg
actaacaggcacaacaaagtcagctccgtgttcaccttgttttgccaccacttcttcaga
cgcgacgagtttccttcacacttcaagaacatccatgctgatatgcagtctagtctgagc
ggctggttcgagcagcgttgccctctgtcctacctcgggtgcacctacagccaaaggaag
ttccgtcctgccagacagaaggctaaagttacctacagtcaggaactcagcaccttcatt
ctcaagccagaggtttcttctttactcttcgagggtgtgaaaactaatcctgccctcaga
aaacatgcaagtaacctggactccctgagcagcctgccccttgagatgctgcagcacatc
gctgggtttttagatagcttggctttgtcccagctagcccaggtctctcagtacatgagg
gaagtctgttccacactgcttcaggagcgaggtatggtcagtctgaaatgggaaaagaaa
acatactcacatggaggatcttcctggagagcaaggaagaaggtctggcagttcagttgt
ctattttccactgtagacagctggtgctttgatgacattccctccatgtctgagcatttg
aaggtctgccctttttatgttactgaacagaggagtgagcctgtacccctggccagcatg
tgtgggaccaaagaacaattacaagagaggagcaccctggtatccatgtttctaccacag
ccgtga
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