Polyodon spathula (Mississippi paddlefish): 121320984
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Entry
121320984 CDS
T07273
Name
(RefSeq) neural cell adhesion molecule 2-like isoform X1
KO
K06491
neural cell adhesion molecule
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pspa04514
Cell adhesion molecule (CAM) interaction
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121320984
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121320984
04517 IgSF CAM signaling
121320984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121320984
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121320984
04090 CD molecules [BR:
pspa04090
]
121320984
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121320984
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121320984
04091 Lectins [BR:
pspa04091
]
121320984
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
121320984
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
NCAM1/2
121320984
CD molecules [BR:
pspa04090
]
Proteins
121320984
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
121320984
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Others
121320984
Lectins [BR:
pspa04091
]
I-type lectins (Siglecs)
121320984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
C2-set_2
Ig_C17orf99
Fn3_ROS1
Ig_PDGFR_d4
Pur_ac_phosph_N
Ig_5
Izumo-Ig
Ig_4
C2-set_3
Ig_MYOM1
Ig_ANOS1
F22D3_4_N
BiPBP_C
VSP
STE2
Motif
Other DBs
NCBI-GeneID:
121320984
NCBI-ProteinID:
XP_041115788
LinkDB
All DBs
Position
9:complement(49173613..49462742)
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AA seq
836 aa
AA seq
DB search
MILNLLYFLGLLICSSQAVLQVTISLSKVELSVGESKFFTCTAIGEPVSIEWFNPQGDRI
VSSQRMVLQTESIRSRLTIYNANVEDAGIYRCQAANAKGQTQEATVVLEIYQKLTFRDVK
TPQEFRQGEDAEIVCNVISSPVPIVTWIYNNREITATTDDRLVVLPNGNMQIQKVGKSDE
GVYRCEARVEARGEIDFRDITVIVNVPPVLTVPQKSFNATADRQESVTFICSASGSPEPA
ITWYRNGRLIEETDQYFLKERSTELTVRNIKQSDGGSYSCRATNKAGTEEKELLLKVFVQ
PHITELKNVSAVEGSQTQISCTAEGEPVPEISWRRQSSGQTFADGDKSLDGRIQVRGRIG
TSALTITGVELSDSGWFNCEAASRIGGHQKGMYLEIEYAPKFQSNQTIYYSWEGNPINVS
CDVIANPLAFIEWRRNKQVLRTESLGNIRIYSTEGRALLEITPMSDKDFGHYDCTAGNTI
GRRSQEYILAQADVPSNPYAVRLSSVSQAMATISFTKPDSHGGVPISYYQVDFKESVSED
WKVVRSHGILTMVLLANLEPNTTYDVRVAAVNGKGRGEYSRIESFQTLPVREPSPPKVHG
QSGRGKAFQLSITKQDDGGAPILEYIVKYRSKDKDDQWIKKTVIGAKDQIILQQLQWNTE
YEVEITALNKLGPSEPAVYHFTMPQKSDITDTLFSGLGLGAVVGLAVAALLLVLGLVDVS
CFFLNQCGLLMCITRRFCGKKTTTSSKSKDLEEGKAAYLKDGSKDPIVEMRAEEERITNP
DDGSTVNEPNETTPLTEPEKLPLKEENGKEALSPNAIEVKVHGDNSIQTNEEDSKA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgattctcaacctgctctatttcctcggattgctcatctgcagcagtcaagctgttctt
caagtgacgatttcactgagcaaagtggagctgagtgtgggagagtccaaattcttcacc
tgcacagcaattggagagccagtcagtatagagtggttcaatccgcagggggacaggatt
gtatcctctcagcgcatggtcctgcagaccgagtccattcgctcccgactcaccatctac
aacgccaatgtggaggatgccggtatatatcggtgccaagcagccaacgccaaggggcag
acacaggaagccacggtggttctggaaatctatcagaagctgacgttccgcgatgtgaag
actccccaggagttccgtcagggggaggatgctgaaattgtctgcaatgtgatcagctcc
cctgtgcctattgtaacctggatctataacaacagagaaatcactgcaacgacagacgat
cggttggtagtgctccctaatggcaacatgcagatccagaaggtgggcaagagcgatgag
ggggtttaccgctgtgaggcccgggtggaggctcggggggagatcgacttcagggacatc
actgtcatcgtcaacgtccctccagttctcactgtgcctcagaagtcctttaacgcaacc
gcagatcgacaggagtcagtgacttttatctgctcagcttctgggtcccctgagcccgcc
atcacctggtacaggaatggtaggctgattgaggagactgaccagtacttcctgaaggag
aggagcacagagctgactgtgcgcaatatcaagcagtccgacggaggctcctattcctgc
agggccacaaacaaagccggtactgaggagaaggagttgcttctaaaagtgttcgttcag
ccccacattaccgagctgaagaacgtgagtgcagtggagggcagccagacccagatctcc
tgcacagcggagggggaaccagtcccagagatatcctggaggaggcagagcagtgggcaa
acctttgcagatggagacaagagcctggatggccggatacaggtgcgaggacggattggc
acgtcagcgttgaccatcacgggagttgagctgtccgactcaggctggttcaactgcgag
gcagcgagcaggatcggcgggcaccagaagggcatgtacctggagattgaatatgcacca
aagtttcagtccaatcaaacaatatattattcttgggaggggaaccctatcaatgtcagc
tgtgatgtcatcgccaaccccttggccttcattgagtggagacggaacaagcaggtcctg
aggactgagagcttgggcaatatcaggatatacagcacagagggtcgagccctcctagag
atcactccaatgtccgataaggattttggccactacgactgcacagctggaaacaccata
gggaggagatcccaggagtatattctggcacaggctgacgtgccctcaaacccctatgct
gtgaggctgagctcagtgtcccaggcaatggcgacaatctccttcacaaagccagactcg
catggtggggtccccatcagctactaccaggtggacttcaaggagagcgtctccgaagac
tggaaagtagtgcgatcccacgggattctgacaatggttctgctggctaacctggagccc
aacacaacctatgatgtcagagtggcagctgtgaatggcaaaggccggggggagtacagc
agaatagaaagtttccagacgttaccagtccgggagcccagtcccccgaaagtgcacggc
cagagtggaagagggaaagccttccagctcagcatcaccaagcaggacgatggtggagca
ccaatcctggagtacatcgtcaagtacaggagtaaagataaagatgaccagtggataaag
aagacagtcattggtgccaaagaccaaatcatcctgcagcagttacagtggaacactgaa
tatgaagttgagattactgcactaaacaagttgggtccctcagagccagcagtctaccat
ttcaccatgccacagaagtcagatattacagacaccctgttcagcggtctgggtctgggg
gcggtggtggggctggccgtggcagccctgctccttgtcctggggcttgtggatgtcagc
tgtttcttcctgaatcagtgcggcctgttgatgtgcatcacccggaggttctgcgggaag
aaaacaaccaccagcagcaagagcaaagacctggaggaaggcaaagcagcatacctgaag
gatgggtcgaaggatcccattgttgagatgcgagcggaagaggagagaataactaaccct
gacgatgggagcactgtaaacgaaccaaatgagaccacaccacttacagagccagagaag
ttgccactgaaagaagagaacggcaaagaagccctgtcgcccaacgccattgaggtcaaa
gttcatggtgacaacagcatccagacaaacgaagaggatagcaaagcataa
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