Polyodon spathula (Mississippi paddlefish): 121321016
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Entry
121321016 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3-like
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121321016
04082 Neuroactive ligand signaling
121321016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121321016
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121321016
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121321016
NCBI-ProteinID:
XP_041115845
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Position
9:complement(50689623..50865602)
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AA seq
502 aa
AA seq
DB search
MRNSWEALLASVGFQVTHIFDCSWESKDSCIPFFSFSETQRNIETVTHSSWSHPYPNMST
QLLAAFLLLSVFHACSQKVHDEDEYDDVTVNQMLAPRAHEADATQILNNLLKEYDKKLRP
DIGIKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWIDSRLKFNSTMKILTLNSNMVG
LIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHS
CPLIFSSYGYPRDEIVYKWRKNSVEASDQKSWRLYQFDFMGLRNTTDIVTTTAGEYVIMS
VYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTVAR
NSLPRVSYVTAMDLFVTVCFLFVFAALIEYAALNYYSSVGKPRGTKKKKQNYSVLDLGPP
STVITLNNSMYWQELEESCMYECLDGKDCQSFFCCYEECKSGGWRKGRIHIDILELDAYS
RVFFPTSFLLFNIVYWVGYLYL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaattcatgggaagctctgttggcttctgttggatttcaagtgacacatattttt
gactgtagctgggaaagcaaagatagctgtatcccctttttctcattttcagaaacgcaa
cgcaacattgaaaccgtcacccattcctcttggagtcatccttacccaaacatgtccacc
cagttactggcggctttcttactgctgtctgttttccacgcctgttcccagaaagttcac
gatgaggacgagtacgatgacgtgacagtgaaccaaatgctggcccccagagctcacgag
gcagacgccacacaaatactgaacaatttgctgaaggagtacgataagaaacttcgtcca
gacattggaataaaaccaacagtcatagatgtggacatttatgttaacagcatcggacca
gtgtcatcaataaatatggaataccaaatagacatcttttttgctcagacgtggattgat
agccgtcttaaattcaacagcacaatgaaaatattgacactgaacagcaatatggtcggg
ctcatttggataccagacaccatcttcagaaattcaaaaacagcagaggcccactggatt
acaacacccaatcagctcctcagaatatggaacgatggcaaaatcttatatacattgagg
cttaccatcaacgcagaatgccagctgcagctgcataactttccaatggatgaacactcc
tgcccactaatattctccagctatgggtaccctagagacgaaatagtttataagtggaga
aaaaactcagtggaagcatcggaccaaaaatcctggcgactttaccagttcgactttatg
ggtctaagaaacaccactgacattgtgacaacaactgcaggtgaatatgtgataatgagt
gtgtactttgaattaagtagaaggatgggatacttcaccattcagacctacattccctgc
atactgactgtggtcttgtcgtgggtctccttttggattaagaaagatgccacgcctgcc
agaacagcacttggcataaccacagtgttgaccatgaccacgctgagtacagtagcacgg
aactcgctgccccgagtctcctacgtcacagcgatggatctgtttgtgacagtgtgcttc
ttgtttgtgtttgcggcgctgatagaatacgcagctctcaattactacagcagtgtaggg
aagcccagaggtacaaagaagaaaaagcaaaactactcggtgcttgacctgggacctcct
tccacagtcatcacattgaacaattccatgtactggcaggagctggaggaatcctgcatg
tacgaatgcctggacggtaaagactgtcagagtttcttctgctgctacgaggaatgtaaa
tcaggcggctggcggaaaggccgaatccacatagacatcttagaattagacgcgtactcc
agagtcttcttccccacgtcattcctgctgttcaatatcgtctactgggtgggctacctc
tatctttaa
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